Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 AC008687.6-201ENST00000596318 630 ntBASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRIM49BA6NDI0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 YBX1P10-201ENST00000444752 975 ntBASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 AC104417.2-201ENST00000562989 1793 ntBASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TRIM49BA6NDI0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.39■■□□□ 1.02
TRIM49BA6NDI0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM49BA6NDI0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 AC141586.3-201ENST00000562166 1838 ntBASIC21.39■■□□□ 1.01
TRIM49BA6NDI0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM49BA6NDI0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM49BA6NDI0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms