Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC162PA2VCL2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC162PA2VCL2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 NBPF21P-201ENST00000425093 1451 ntBASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 AL032819.2-201ENST00000624543 2162 ntBASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 TUBB8P6-201ENST00000436895 1288 ntBASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC162PA2VCL2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 AC006058.3-201ENST00000606217 1069 ntBASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 ZNF815P-204ENST00000434898 1737 ntBASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC162PA2VCL2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 AL023875.1-201ENST00000640777 796 ntBASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 AC073648.6-201ENST00000641589 218 ntBASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC162PA2VCL2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC162PA2VCL2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC162PA2VCL2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms