Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC138932.1-201ENST00000534164 6830 ntBASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.61■□□□□ 0.09
TCRBV4S1A1TA0A5B7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC098818.2-201ENST00000564925 2320 ntBASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC133681.1-201ENST00000465482 601 ntBASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 MIR4497-201ENST00000583208 89 ntBASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AP001412.1-201ENST00000608405 714 ntBASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC093484.2-201ENST00000580996 2166 ntBASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.6■□□□□ 0.09
TCRBV4S1A1TA0A5B7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AL020996.1-203ENST00000536896 2307 ntBASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SNORA78-201ENST00000459373 127 ntBASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.58■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC009237.14-201ENST00000609975 1594 ntBASIC15.58■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV4S1A1TA0A5B7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms