Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV25A0A0B4J276 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV25A0A0B4J276 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV25A0A0B4J276 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV25A0A0B4J276 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV25A0A0B4J276 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV25A0A0B4J276 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV25A0A0B4J276 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV25A0A0B4J276 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 AC093827.2-201ENST00000512654 315 ntBASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 AC026271.3-201ENST00000571884 352 ntBASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 Z99916.2-201ENST00000604037 246 ntBASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV25A0A0B4J276 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 AL031985.4-201ENST00000642138 673 ntBASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 KRT17P2-201ENST00000300992 1314 ntBASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV25A0A0B4J276 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV25A0A0B4J276 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms