Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 KRT8P20-201ENST00000423953 1409 ntBASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 KRT87P-202ENST00000534226 1464 ntBASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV1-1A0A0B4J248 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 IRX1P1-201ENST00000438849 1838 ntBASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 AC010141.2-201ENST00000452426 721 ntBASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV1-1A0A0B4J248 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 AC105265.2-201ENST00000467189 838 ntBASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV1-1A0A0B4J248 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 AC009299.2-201ENST00000482477 511 ntBASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV1-1A0A0B4J248 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms