Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV2A0A0B4J234 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 FAM201B-201ENST00000458407 597 ntBASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV2A0A0B4J234 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 TUBB8P6-201ENST00000436895 1288 ntBASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 AC133681.1-201ENST00000465482 601 ntBASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 NBPF21P-201ENST00000425093 1451 ntBASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV2A0A0B4J234 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 AC239809.2-201ENST00000415381 517 ntBASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 RN7SL471P-201ENST00000580476 299 ntBASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 AC006058.3-201ENST00000606217 1069 ntBASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV2A0A0B4J234 KRT8P8-201ENST00000434750 1448 ntBASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 AC112907.3-201ENST00000577781 2400 ntBASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV2A0A0B4J234 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms