Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC092747.4-201ENST00000620519 1861 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 RNU6-1339P-201ENST00000363574 91 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AL645927.1-201ENST00000396783 406 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 MIR1303-201ENST00000408625 86 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC016769.2-201ENST00000414815 475 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 HIGD1AP15-201ENST00000416198 280 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC092634.2-201ENST00000428146 1010 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC004980.3-201ENST00000447046 365 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 Z92846.1-201ENST00000456203 268 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC114322.1-201ENST00000506771 926 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AP000859.1-201ENST00000525536 307 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 OR7E128P-201ENST00000532736 1024 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 OR1F2P-201ENST00000570470 933 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC022022.2-201ENST00000602989 360 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC008814.1-201ENST00000603797 406 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC093424.1-201ENST00000604999 338 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC133644.2-201ENST00000608142 540 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 VN1R74P-201ENST00000613259 503 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC123767.1-202ENST00000620407 817 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AC006840.1-201ENST00000623069 542 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AL121594.5-201ENST00000631724 573 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 TTC39DP-201ENST00000416781 1688 ntBASIC6.14□□□□□ -1.43
CHMP4CQ96CF2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 RNU4-4P-201ENST00000364588 130 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 RNA5SP455-201ENST00000365190 119 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AL021331.1-201ENST00000402817 582 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 NUDT19P3-201ENST00000404698 555 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AL590290.1-201ENST00000405336 380 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 U3.36-201ENST00000408418 213 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 RPS7P9-201ENST00000414704 586 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC048351.1-201ENST00000420064 602 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 GTF2IP2-201ENST00000424290 697 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 COX6CP13-201ENST00000428703 226 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 RPS29P10-201ENST00000439197 166 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC092647.3-201ENST00000443044 633 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 ZNF886P-201ENST00000450781 723 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 RNU7-140P-201ENST00000459546 60 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 RPL35AP28-201ENST00000459730 331 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 RPL23AP12-201ENST00000467573 473 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 RN7SKP287-201ENST00000516546 266 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AP006245.2-201ENST00000522004 300 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC018552.1-201ENST00000562099 811 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 EIF1P6-201ENST00000600054 334 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 CLIC4P2-201ENST00000601934 717 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC015726.3-201ENST00000624501 418 ntBASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.13□□□□□ -1.43
CHMP4CQ96CF2 LINC01739-205ENST00000641890 573 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms