Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC024595.1-201ENST00000623088 387 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC007342.8-201ENST00000623278 678 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC135068.12-201ENST00000637370 931 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC074101.1-201ENST00000637861 241 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC103706.2-201ENST00000638080 240 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AC000374.1-201ENST00000434698 1745 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 CASC19-221ENST00000641309 1382 ntBASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4AQ8WYN0 AL138820.1-201ENST00000617901 5305 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AL121950.1-201ENST00000624993 2077 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 Y_RNA.318-201ENST00000365131 97 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 SNORA2.3-201ENST00000383920 135 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 HNRNPDP2-201ENST00000406475 478 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 RN7SKP182-201ENST00000410772 298 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 COX6CP13-201ENST00000428703 226 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AL390023.1-201ENST00000428836 262 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 COX7BP2-201ENST00000437976 242 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 CDY12P-201ENST00000440679 1015 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 CDY13P-201ENST00000445813 1015 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 ANKRD26P4-201ENST00000455755 950 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 Z92846.1-201ENST00000456203 268 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 RPL23AP37-201ENST00000479658 549 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC091435.1-201ENST00000505442 584 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 RPS4XP20-201ENST00000505751 772 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 FABP5P12-201ENST00000515543 389 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC083923.1-201ENST00000523708 376 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC090819.1-201ENST00000523800 1111 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 PDCL2P2-201ENST00000533651 189 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC008015.1-201ENST00000555505 465 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 SNORD95-201ENST00000579879 68 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AP001542.2-201ENST00000593141 364 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AP002884.5-201ENST00000595053 1132 ntBASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4AQ8WYN0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 GTF2H2B-203ENST00000508065 1432 ntBASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 AC009804.1-201ENST00000400949 179 ntBASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 AL034374.1-201ENST00000406329 351 ntBASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.26□□□□□ -1.57
ATG4AQ8WYN0 MIR1182-201ENST00000408363 97 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms