Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC6.91□□□□□ -1.3
ERCC3P19447 AL831737.1-201ENST00000441288 271 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.91□□□□□ -1.3
ERCC3P19447 CDC27P1-201ENST00000445384 715 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.91□□□□□ -1.3
ERCC3P19447 RPL18AP17-201ENST00000455326 198 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 CFTRP1-201ENST00000456646 183 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 RN7SL629P-201ENST00000489622 285 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AL117351.2-201ENST00000513571 157 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 RNA5SP362-201ENST00000516048 118 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 CYCSP22-201ENST00000517555 339 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC3P19447 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.91□□□□□ -1.3
ERCC3P19447 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.91□□□□□ -1.3
ERCC3P19447 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC6.91□□□□□ -1.3
ERCC3P19447 PSMB7P1-201ENST00000556349 514 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AC007225.2-201ENST00000562529 256 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AC010547.6-201ENST00000571789 193 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC3P19447 AC024560.3-201ENST00000608482 349 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AL590240.3-201ENST00000621416 943 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AL356596.1-201ENST00000624230 379 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.91□□□□□ -1.3
ERCC3P19447 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC3P19447 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.91□□□□□ -1.3
ERCC3P19447 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.91□□□□□ -1.3
ERCC3P19447 ZNF37BP-203ENST00000452306 1352 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 HDAC1P2-201ENST00000453661 1398 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AC119674.1-213ENST00000641177 1386 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 AC092079.1-201ENST00000558620 1985 ntBASIC6.91□□□□□ -1.3
ERCC3P19447 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC3P19447 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ERCC3P19447 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.91□□□□□ -1.3
ERCC3P19447 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
ERCC3P19447 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ERCC3P19447 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ERCC3P19447 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ERCC3P19447 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
ERCC3P19447 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ERCC3P19447 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
ERCC3P19447 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
ERCC3P19447 SELENOWP1-201ENST00000322792 252 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
ERCC3P19447 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC3P19447 RNU4-21P-201ENST00000362802 126 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 RNU6-216P-201ENST00000363282 104 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
ERCC3P19447 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
ERCC3P19447 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
ERCC3P19447 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC3P19447 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ERCC3P19447 RNY3P10-201ENST00000384764 102 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
ERCC3P19447 AC007066.1-201ENST00000392902 381 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 Y_RNA.599-201ENST00000410489 109 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 AC004022.2-201ENST00000413824 193 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 RPL7P41-201ENST00000485823 957 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 AC083795.1-201ENST00000491760 320 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 RN7SL57P-201ENST00000493687 290 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC3P19447 AC006499.5-201ENST00000505037 514 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 AC004069.2-201ENST00000505438 1114 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.9□□□□□ -1.3
ERCC3P19447 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC3P19447 AC113430.1-201ENST00000506872 718 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.9□□□□□ -1.3
ERCC3P19447 RNU6-583P-201ENST00000516012 92 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 AC008802.1-201ENST00000519121 791 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
ERCC3P19447 AC137768.1-201ENST00000549998 553 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC3P19447 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC3P19447 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.9□□□□□ -1.3
ERCC3P19447 AC091078.2-201ENST00000557145 559 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC3P19447 MIR4443-201ENST00000585052 53 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 AC080078.2-201ENST00000603766 501 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 FAM27E4-201ENST00000605259 342 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.9□□□□□ -1.3
ERCC3P19447 AC010678.1-201ENST00000614118 713 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 AC006927.3-201ENST00000638789 384 ntBASIC6.9□□□□□ -1.3
ERCC3P19447 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
ERCC3P19447 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ERCC3P19447 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.9□□□□□ -1.31
ERCC3P19447 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ERCC3P19447 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC3P19447 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC3P19447 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC3P19447 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC3P19447 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ERCC3P19447 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.89□□□□□ -1.31
ERCC3P19447 MIR143-201ENST00000385300 106 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AL391361.1-201ENST00000405580 489 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.89□□□□□ -1.31
ERCC3P19447 RNU2-50P-201ENST00000410494 143 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AL663109.1-201ENST00000411498 844 ntBASIC6.89□□□□□ -1.31
ERCC3P19447 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.89□□□□□ -1.31
ERCC3P19447 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms