Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CFTRP13569 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CFTRP13569 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CFTRP13569 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CFTRP13569 AC021242.1-201ENST00000507315 2035 ntBASIC7.04□□□□□ -1.28
CFTRP13569 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CFTRP13569 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CFTRP13569 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CFTRP13569 AC092647.1-201ENST00000420654 287 ntBASIC7.04□□□□□ -1.28
CFTRP13569 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.04□□□□□ -1.28
CFTRP13569 AL159987.2-201ENST00000432754 307 ntBASIC7.04□□□□□ -1.28
CFTRP13569 CREM-238ENST00000488741 651 ntTSL 2 BASIC7.04□□□□□ -1.28
CFTRP13569 UBE2CP3-201ENST00000502715 450 ntBASIC7.04□□□□□ -1.28
CFTRP13569 AC005972.3-201ENST00000606304 481 ntBASIC7.04□□□□□ -1.28
CFTRP13569 AL353726.1-201ENST00000614041 1000 ntBASIC7.04□□□□□ -1.28
CFTRP13569 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC7.04□□□□□ -1.28
CFTRP13569 AP001153.1-201ENST00000641024 338 ntBASIC7.04□□□□□ -1.28
CFTRP13569 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CFTRP13569 CCAT2-201ENST00000630920 1752 ntBASIC7.03□□□□□ -1.28
CFTRP13569 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
CFTRP13569 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CFTRP13569 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CFTRP13569 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.03□□□□□ -1.28
CFTRP13569 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CFTRP13569 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC7.03□□□□□ -1.28
CFTRP13569 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CFTRP13569 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CFTRP13569 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CFTRP13569 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CFTRP13569 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC7.03□□□□□ -1.28
CFTRP13569 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC7.03□□□□□ -1.28
CFTRP13569 RPL23AP25-201ENST00000430973 463 ntBASIC7.03□□□□□ -1.28
CFTRP13569 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC7.03□□□□□ -1.28
CFTRP13569 AC104306.1-201ENST00000449702 371 ntBASIC7.03□□□□□ -1.28
CFTRP13569 RPL23AP37-201ENST00000479658 549 ntBASIC7.03□□□□□ -1.28
CFTRP13569 CAB39P1-201ENST00000502277 460 ntBASIC7.03□□□□□ -1.28
CFTRP13569 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.03□□□□□ -1.28
CFTRP13569 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.03□□□□□ -1.28
CFTRP13569 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7.03□□□□□ -1.28
CFTRP13569 MIR7975-201ENST00000619350 68 ntBASIC7.03□□□□□ -1.28
CFTRP13569 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CFTRP13569 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CFTRP13569 AC058791.1-201ENST00000608412 3198 ntBASIC7.03□□□□□ -1.28
CFTRP13569 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CFTRP13569 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CFTRP13569 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CFTRP13569 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CFTRP13569 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CFTRP13569 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
CFTRP13569 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CFTRP13569 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC7.02□□□□□ -1.29
CFTRP13569 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.02□□□□□ -1.29
CFTRP13569 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.02□□□□□ -1.29
CFTRP13569 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CFTRP13569 SNORA70.24-201ENST00000517233 118 ntBASIC7.02□□□□□ -1.29
CFTRP13569 TRAPPC2P2-201ENST00000517589 409 ntBASIC7.02□□□□□ -1.29
CFTRP13569 AC234782.5-201ENST00000617723 324 ntBASIC7.02□□□□□ -1.29
CFTRP13569 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CFTRP13569 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC7.02□□□□□ -1.29
CFTRP13569 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CFTRP13569 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.02□□□□□ -1.29
CFTRP13569 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CFTRP13569 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CFTRP13569 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC7.01□□□□□ -1.29
CFTRP13569 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC7.01□□□□□ -1.29
CFTRP13569 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC7.01□□□□□ -1.29
CFTRP13569 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.01□□□□□ -1.29
CFTRP13569 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CFTRP13569 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.01□□□□□ -1.29
CFTRP13569 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.01□□□□□ -1.29
CFTRP13569 GTF3AP5-201ENST00000442645 697 ntBASIC7.01□□□□□ -1.29
CFTRP13569 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CFTRP13569 HMGB3P16-201ENST00000508037 287 ntBASIC7.01□□□□□ -1.29
CFTRP13569 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.01□□□□□ -1.29
CFTRP13569 AC090151.1-201ENST00000520784 730 ntBASIC7.01□□□□□ -1.29
CFTRP13569 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.01□□□□□ -1.29
CFTRP13569 OR2BH1P-201ENST00000608850 864 ntBASIC7.01□□□□□ -1.29
CFTRP13569 AC093297.3-201ENST00000607056 2517 ntBASIC7.01□□□□□ -1.29
CFTRP13569 AL035425.3-201ENST00000564206 4996 ntBASIC7.01□□□□□ -1.29
CFTRP13569 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CFTRP13569 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CFTRP13569 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CFTRP13569 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC7.01□□□□□ -1.29
CFTRP13569 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.01□□□□□ -1.29
CFTRP13569 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CFTRP13569 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CFTRP13569 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CFTRP13569 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CFTRP13569 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC7.01□□□□□ -1.29
CFTRP13569 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC7□□□□□ -1.29
CFTRP13569 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC7□□□□□ -1.29
CFTRP13569 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CFTRP13569 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CFTRP13569 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
CFTRP13569 RNA5SP72-201ENST00000364442 117 ntBASIC7□□□□□ -1.29
CFTRP13569 MIR218-2-201ENST00000385006 110 ntBASIC7□□□□□ -1.29
CFTRP13569 TMX2P1-201ENST00000436507 708 ntBASIC7□□□□□ -1.29
CFTRP13569 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC7□□□□□ -1.29
CFTRP13569 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7□□□□□ -1.29
CFTRP13569 AL645927.2-201ENST00000618350 349 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms