Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 U8.18-201ENST00000459285 133 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 AC022336.1-201ENST00000475510 337 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A1P12107 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A1P12107 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A1P12107 EOGT-210ENST00000615922 1931 ntBASIC4.72□□□□□ -1.65
COL11A1P12107 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
COL11A1P12107 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
COL11A1P12107 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL11A1P12107 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.71□□□□□ -1.65
COL11A1P12107 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
COL11A1P12107 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
COL11A1P12107 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
COL11A1P12107 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL11A1P12107 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL11A1P12107 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL11A1P12107 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL11A1P12107 OR4A15-201ENST00000314706 1035 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 SNORA62.3-201ENST00000365110 153 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.71□□□□□ -1.66
COL11A1P12107 HMGB3P19-201ENST00000403971 560 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 MIR1179-201ENST00000408703 91 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 RN7SKP156-201ENST00000410308 342 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 AC007389.2-201ENST00000434630 306 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.71□□□□□ -1.66
COL11A1P12107 RPL6P5-201ENST00000445678 828 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.71□□□□□ -1.66
COL11A1P12107 AC110792.1-201ENST00000491826 472 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.71□□□□□ -1.66
COL11A1P12107 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.71□□□□□ -1.66
COL11A1P12107 AC109635.6-201ENST00000525487 1113 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.71□□□□□ -1.66
COL11A1P12107 AC010487.1-201ENST00000594408 1172 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 AC104662.1-201ENST00000604448 511 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 AC097505.1-201ENST00000610199 565 ntBASIC4.71□□□□□ -1.66
COL11A1P12107 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.71□□□□□ -1.66
COL11A1P12107 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
COL11A1P12107 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
COL11A1P12107 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
COL11A1P12107 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL11A1P12107 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL11A1P12107 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL11A1P12107 VDAC1P9-201ENST00000412766 841 ntBASIC4.7□□□□□ -1.66
COL11A1P12107 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.7□□□□□ -1.66
COL11A1P12107 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.7□□□□□ -1.66
COL11A1P12107 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.7□□□□□ -1.66
COL11A1P12107 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.7□□□□□ -1.66
COL11A1P12107 RPL7P24-201ENST00000493052 752 ntBASIC4.7□□□□□ -1.66
COL11A1P12107 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.7□□□□□ -1.66
COL11A1P12107 NPM1P21-201ENST00000513394 762 ntBASIC4.7□□□□□ -1.66
COL11A1P12107 AC138938.1-201ENST00000515431 782 ntBASIC4.7□□□□□ -1.66
COL11A1P12107 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.7□□□□□ -1.66
COL11A1P12107 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.7□□□□□ -1.66
COL11A1P12107 RN7SL435P-201ENST00000584418 282 ntBASIC4.7□□□□□ -1.66
COL11A1P12107 AC099669.2-201ENST00000616549 437 ntBASIC4.7□□□□□ -1.66
COL11A1P12107 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL11A1P12107 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL11A1P12107 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.7□□□□□ -1.66
COL11A1P12107 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL11A1P12107 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL11A1P12107 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL11A1P12107 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.7□□□□□ -1.66
COL11A1P12107 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
COL11A1P12107 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL11A1P12107 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL11A1P12107 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.69□□□□□ -1.66
COL11A1P12107 RN7SKP74-201ENST00000362849 309 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL11A1P12107 RPS23P10-201ENST00000416185 486 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.69□□□□□ -1.66
COL11A1P12107 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.69□□□□□ -1.66
COL11A1P12107 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.69□□□□□ -1.66
COL11A1P12107 FCF1P7-201ENST00000451185 558 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 RN7SKP141-201ENST00000516167 338 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 RNA5SP179-201ENST00000517284 121 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.69□□□□□ -1.66
COL11A1P12107 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.69□□□□□ -1.66
COL11A1P12107 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.69□□□□□ -1.66
COL11A1P12107 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.69□□□□□ -1.66
COL11A1P12107 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.69□□□□□ -1.66
COL11A1P12107 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.69□□□□□ -1.66
COL11A1P12107 AL049840.6-202ENST00000603373 279 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.69□□□□□ -1.66
COL11A1P12107 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL11A1P12107 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL11A1P12107 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL11A1P12107 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
COL11A1P12107 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL11A1P12107 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.69□□□□□ -1.66
COL11A1P12107 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
COL11A1P12107 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.69□□□□□ -1.66
COL11A1P12107 SNORA63.1-201ENST00000362493 131 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.69□□□□□ -1.66
COL11A1P12107 AC093578.1-201ENST00000415219 368 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.69□□□□□ -1.66
COL11A1P12107 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.69□□□□□ -1.66
COL11A1P12107 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL11A1P12107 RPL5P32-201ENST00000454085 879 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 AC090151.1-201ENST00000520784 730 ntBASIC4.69□□□□□ -1.66
COL11A1P12107 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms