Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 RNU6-259P-201ENST00000383999 107 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 MIR1286-201ENST00000408112 78 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 RNU2-65P-201ENST00000410162 185 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC099677.3-201ENST00000427081 395 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 KCTD9P3-201ENST00000434597 1169 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AL935212.3-201ENST00000450729 284 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC112187.1-201ENST00000455837 479 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 PNPLA4P1-201ENST00000458328 305 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 RNU6-1153P-201ENST00000516760 105 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AP001207.1-201ENST00000524051 481 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 OR10G5P-201ENST00000532733 358 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AL138976.2-201ENST00000563989 694 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 PART1_1.1-201ENST00000611761 217 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 SRRM1P3-201ENST00000426911 2678 ntBASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.85□□□□□ -1.15
CSB-PGBD3P0DP91 MTND4P12-201ENST00000498999 1377 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 MRRFP1-201ENST00000435941 1675 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 IGKV7-3-201ENST00000357453 298 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 Z97055.1-201ENST00000419730 712 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 OFD1P18Y-201ENST00000420889 959 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 Z99497.1-201ENST00000421282 135 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 RPS27P18-201ENST00000431701 247 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 RPL21P110-201ENST00000433345 446 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC000111.3-201ENST00000433478 193 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 USP9YP8-201ENST00000441913 500 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 TCEA1P3-201ENST00000443005 880 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC011225.1-201ENST00000457751 369 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 RN7SL547P-201ENST00000490793 290 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC006499.3-201ENST00000506077 748 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 CYP4F27P-201ENST00000514557 494 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 HMGB1P23-201ENST00000518743 568 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 TPM3P3-201ENST00000521343 354 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 MIR4700-201ENST00000578311 74 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC145423.1-201ENST00000605712 336 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC130448.2-201ENST00000624082 374 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 AC135068.5-201ENST00000624197 983 ntBASIC7.84□□□□□ -1.15
CSB-PGBD3P0DP91 PCMTD1P7-201ENST00000634506 357 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms