Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.66□□□□□ -1.66
RETP07949 HSPA8P17-201ENST00000427029 1382 ntBASIC4.65□□□□□ -1.66
RETP07949 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RETP07949 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RETP07949 AC007390.2-201ENST00000606229 3803 ntBASIC4.65□□□□□ -1.66
RETP07949 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RETP07949 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
RETP07949 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RETP07949 SNORA62.3-201ENST00000365110 153 ntBASIC4.65□□□□□ -1.67
RETP07949 RNU1-82P-201ENST00000390851 165 ntBASIC4.65□□□□□ -1.67
RETP07949 Z98745.1-201ENST00000402553 494 ntBASIC4.65□□□□□ -1.67
RETP07949 SNORA11.1-201ENST00000408133 129 ntBASIC4.65□□□□□ -1.67
RETP07949 RN7SKP202-201ENST00000410439 330 ntBASIC4.65□□□□□ -1.67
RETP07949 RCC2P2-201ENST00000422174 918 ntBASIC4.65□□□□□ -1.67
RETP07949 RPL7AP25-201ENST00000423357 805 ntBASIC4.65□□□□□ -1.67
RETP07949 TRGV7-201ENST00000427089 353 ntBASIC4.65□□□□□ -1.67
RETP07949 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.65□□□□□ -1.67
RETP07949 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.65□□□□□ -1.67
RETP07949 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.65□□□□□ -1.67
RETP07949 VN1R34P-201ENST00000447387 883 ntBASIC4.65□□□□□ -1.67
RETP07949 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.65□□□□□ -1.67
RETP07949 ZFRP1-201ENST00000457579 2970 ntBASIC4.65□□□□□ -1.67
RETP07949 RPL21P126-201ENST00000470049 478 ntBASIC4.65□□□□□ -1.67
RETP07949 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.65□□□□□ -1.67
RETP07949 AC105137.1-201ENST00000484355 562 ntBASIC4.65□□□□□ -1.67
RETP07949 KCTD9P6-201ENST00000522306 950 ntBASIC4.65□□□□□ -1.67
RETP07949 AP003730.1-201ENST00000524605 285 ntBASIC4.65□□□□□ -1.67
RETP07949 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.65□□□□□ -1.67
RETP07949 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.65□□□□□ -1.67
RETP07949 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.65□□□□□ -1.67
RETP07949 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.65□□□□□ -1.67
RETP07949 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RETP07949 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RETP07949 MAPK10-320ENST00000641462 6696 ntBASIC4.65□□□□□ -1.67
RETP07949 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.65□□□□□ -1.67
RETP07949 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
RETP07949 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RETP07949 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RETP07949 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.64□□□□□ -1.67
RETP07949 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RETP07949 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RETP07949 SNORA70.4-201ENST00000365509 134 ntBASIC4.64□□□□□ -1.67
RETP07949 RNU1-13P-201ENST00000384499 162 ntBASIC4.64□□□□□ -1.67
RETP07949 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RETP07949 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.64□□□□□ -1.67
RETP07949 RN7SKP199-201ENST00000410325 305 ntBASIC4.64□□□□□ -1.67
RETP07949 RNU6-628P-201ENST00000410675 107 ntBASIC4.64□□□□□ -1.67
RETP07949 RPL23AP26-201ENST00000412728 464 ntBASIC4.64□□□□□ -1.67
RETP07949 YWHAZP2-201ENST00000440317 728 ntBASIC4.64□□□□□ -1.67
RETP07949 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.64□□□□□ -1.67
RETP07949 RPL5P16-201ENST00000471467 790 ntBASIC4.64□□□□□ -1.67
RETP07949 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.64□□□□□ -1.67
RETP07949 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.64□□□□□ -1.67
RETP07949 AGGF1P3-201ENST00000493675 1213 ntBASIC4.64□□□□□ -1.67
RETP07949 RN7SL558P-201ENST00000497468 299 ntBASIC4.64□□□□□ -1.67
RETP07949 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RETP07949 AC023632.4-201ENST00000517783 191 ntBASIC4.64□□□□□ -1.67
RETP07949 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.64□□□□□ -1.67
RETP07949 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.64□□□□□ -1.67
RETP07949 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.64□□□□□ -1.67
RETP07949 OR7A19P-201ENST00000608051 733 ntBASIC4.64□□□□□ -1.67
RETP07949 AC099676.1-201ENST00000608886 657 ntBASIC4.64□□□□□ -1.67
RETP07949 MIR6075-201ENST00000620782 95 ntBASIC4.64□□□□□ -1.67
RETP07949 AL356863.1-201ENST00000623378 1080 ntBASIC4.64□□□□□ -1.67
RETP07949 MIR3653-201ENST00000625572 110 ntBASIC4.64□□□□□ -1.67
RETP07949 U3.53-201ENST00000628922 216 ntBASIC4.64□□□□□ -1.67
RETP07949 MIR492-201ENST00000638676 116 ntBASIC4.64□□□□□ -1.67
RETP07949 AC108467.2-201ENST00000617640 1597 ntBASIC4.64□□□□□ -1.67
RETP07949 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.64□□□□□ -1.67
RETP07949 AC125257.1-201ENST00000560400 2930 ntBASIC4.64□□□□□ -1.67
RETP07949 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.64□□□□□ -1.67
RETP07949 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.64□□□□□ -1.67
RETP07949 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RETP07949 MFSD8-242ENST00000641690 4199 ntBASIC4.64□□□□□ -1.67
RETP07949 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RETP07949 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RETP07949 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.63□□□□□ -1.67
RETP07949 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RETP07949 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.63□□□□□ -1.67
RETP07949 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RETP07949 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RETP07949 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.63□□□□□ -1.67
RETP07949 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
RETP07949 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RETP07949 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RETP07949 RNU1-83P-201ENST00000363426 164 ntBASIC4.63□□□□□ -1.67
RETP07949 AL022722.2-201ENST00000402519 180 ntBASIC4.63□□□□□ -1.67
RETP07949 AL121834.1-202ENST00000404494 277 ntBASIC4.63□□□□□ -1.67
RETP07949 RNA5SP317-201ENST00000410176 116 ntBASIC4.63□□□□□ -1.67
RETP07949 RNA5SP311-201ENST00000411290 116 ntBASIC4.63□□□□□ -1.67
RETP07949 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.63□□□□□ -1.67
RETP07949 RGS17P1-201ENST00000423358 553 ntBASIC4.63□□□□□ -1.67
RETP07949 HMGB3P10-201ENST00000434734 572 ntBASIC4.63□□□□□ -1.67
RETP07949 AL358232.1-201ENST00000448030 501 ntBASIC4.63□□□□□ -1.67
RETP07949 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.63□□□□□ -1.67
RETP07949 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.63□□□□□ -1.67
RETP07949 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.63□□□□□ -1.67
RETP07949 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.63□□□□□ -1.67
RETP07949 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.63□□□□□ -1.67
RETP07949 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms