Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.86□□□□□ -1.63
VTNP04004 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 RN7SKP227-201ENST00000364445 330 ntBASIC4.86□□□□□ -1.63
VTNP04004 RNA5SP366-201ENST00000365454 123 ntBASIC4.86□□□□□ -1.63
VTNP04004 RNU6-729P-201ENST00000384399 107 ntBASIC4.86□□□□□ -1.63
VTNP04004 MIR3065-201ENST00000390137 79 ntBASIC4.86□□□□□ -1.63
VTNP04004 EI24P3-201ENST00000399046 1062 ntBASIC4.86□□□□□ -1.63
VTNP04004 AL583835.1-201ENST00000399570 407 ntBASIC4.86□□□□□ -1.63
VTNP04004 CTSL3P-202ENST00000412179 788 ntBASIC4.86□□□□□ -1.63
VTNP04004 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.86□□□□□ -1.63
VTNP04004 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.86□□□□□ -1.63
VTNP04004 RPL21P91-201ENST00000429231 479 ntBASIC4.86□□□□□ -1.63
VTNP04004 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.86□□□□□ -1.63
VTNP04004 FTLP19-201ENST00000433300 394 ntBASIC4.86□□□□□ -1.63
VTNP04004 UBE2V1P3-201ENST00000439651 417 ntBASIC4.86□□□□□ -1.63
VTNP04004 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.86□□□□□ -1.63
VTNP04004 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.86□□□□□ -1.63
VTNP04004 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 AC090543.1-201ENST00000492168 485 ntBASIC4.86□□□□□ -1.63
VTNP04004 ASNSP4-201ENST00000511103 447 ntBASIC4.86□□□□□ -1.63
VTNP04004 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.86□□□□□ -1.63
VTNP04004 RN7SL176P-201ENST00000580352 264 ntBASIC4.86□□□□□ -1.63
VTNP04004 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.86□□□□□ -1.63
VTNP04004 AC079587.1-201ENST00000603846 277 ntBASIC4.86□□□□□ -1.63
VTNP04004 AC010857.1-201ENST00000606398 594 ntBASIC4.86□□□□□ -1.63
VTNP04004 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.86□□□□□ -1.63
VTNP04004 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.86□□□□□ -1.63
VTNP04004 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.86□□□□□ -1.63
VTNP04004 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.86□□□□□ -1.63
VTNP04004 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.86□□□□□ -1.63
VTNP04004 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.86□□□□□ -1.63
VTNP04004 AC009951.1-201ENST00000623674 2614 ntBASIC4.86□□□□□ -1.63
VTNP04004 AL158163.1-201ENST00000603915 1649 ntBASIC4.86□□□□□ -1.63
VTNP04004 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VTNP04004 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
VTNP04004 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.85□□□□□ -1.63
VTNP04004 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.85□□□□□ -1.63
VTNP04004 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VTNP04004 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.85□□□□□ -1.63
VTNP04004 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 AC015813.6-201ENST00000624409 5808 ntBASIC4.85□□□□□ -1.63
VTNP04004 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 RNU1-63P-201ENST00000383902 164 ntBASIC4.85□□□□□ -1.63
VTNP04004 RNU6-1320P-201ENST00000390838 107 ntBASIC4.85□□□□□ -1.63
VTNP04004 RNA5SP105-201ENST00000391123 113 ntBASIC4.85□□□□□ -1.63
VTNP04004 RNU6-1269P-201ENST00000391139 107 ntBASIC4.85□□□□□ -1.63
VTNP04004 CCNB2P1-201ENST00000399411 1150 ntBASIC4.85□□□□□ -1.63
VTNP04004 MIR1193-201ENST00000408109 78 ntBASIC4.85□□□□□ -1.63
VTNP04004 AL357078.2-201ENST00000416486 427 ntBASIC4.85□□□□□ -1.63
VTNP04004 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.85□□□□□ -1.63
VTNP04004 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.85□□□□□ -1.63
VTNP04004 ARL5AP3-201ENST00000439327 386 ntBASIC4.85□□□□□ -1.63
VTNP04004 RPL7P33-201ENST00000444159 742 ntBASIC4.85□□□□□ -1.63
VTNP04004 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.85□□□□□ -1.63
VTNP04004 MTND2P39-201ENST00000457230 764 ntBASIC4.85□□□□□ -1.63
VTNP04004 RNU6-599P-201ENST00000459383 107 ntBASIC4.85□□□□□ -1.63
VTNP04004 RNU6-1193P-201ENST00000459461 107 ntBASIC4.85□□□□□ -1.63
VTNP04004 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.85□□□□□ -1.63
VTNP04004 AC104629.2-201ENST00000468627 598 ntBASIC4.85□□□□□ -1.63
VTNP04004 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.85□□□□□ -1.63
VTNP04004 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.85□□□□□ -1.63
VTNP04004 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.85□□□□□ -1.63
VTNP04004 AC108475.1-201ENST00000507880 950 ntBASIC4.85□□□□□ -1.63
VTNP04004 PARP4P3-201ENST00000510265 317 ntBASIC4.85□□□□□ -1.63
VTNP04004 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.85□□□□□ -1.63
VTNP04004 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.85□□□□□ -1.63
VTNP04004 RNU6-513P-201ENST00000516104 104 ntBASIC4.85□□□□□ -1.63
VTNP04004 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.85□□□□□ -1.63
VTNP04004 AC092653.1-201ENST00000608509 531 ntBASIC4.85□□□□□ -1.63
VTNP04004 AL512506.1-201ENST00000613918 449 ntBASIC4.85□□□□□ -1.63
VTNP04004 RNU6-368P-201ENST00000620928 107 ntBASIC4.85□□□□□ -1.63
VTNP04004 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
VTNP04004 AC015722.2-201ENST00000622210 551 ntBASIC4.85□□□□□ -1.63
VTNP04004 RNU6-538P-201ENST00000622329 107 ntBASIC4.85□□□□□ -1.63
VTNP04004 MIR3653-201ENST00000625572 110 ntBASIC4.85□□□□□ -1.63
VTNP04004 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.85□□□□□ -1.63
VTNP04004 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VTNP04004 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
VTNP04004 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.85□□□□□ -1.63
VTNP04004 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTNP04004 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VTNP04004 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms