Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
LDB2O43679 RN7SKP104-201ENST00000362605 328 ntBASIC4.89□□□□□ -1.63
LDB2O43679 RNA5SP123-201ENST00000363244 119 ntBASIC4.89□□□□□ -1.63
LDB2O43679 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDB2O43679 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDB2O43679 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
LDB2O43679 AL109941.1-201ENST00000401925 229 ntBASIC4.89□□□□□ -1.63
LDB2O43679 RPL37P18-201ENST00000411602 243 ntBASIC4.89□□□□□ -1.63
LDB2O43679 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LDB2O43679 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.89□□□□□ -1.63
LDB2O43679 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.89□□□□□ -1.63
LDB2O43679 MTCO2P21-201ENST00000419780 677 ntBASIC4.89□□□□□ -1.63
LDB2O43679 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LDB2O43679 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.89□□□□□ -1.63
LDB2O43679 AC006466.1-201ENST00000438721 289 ntBASIC4.89□□□□□ -1.63
LDB2O43679 Z80107.2-201ENST00000445127 392 ntBASIC4.89□□□□□ -1.63
LDB2O43679 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDB2O43679 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
LDB2O43679 TRY2P-201ENST00000448860 689 ntBASIC4.89□□□□□ -1.63
LDB2O43679 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.89□□□□□ -1.63
LDB2O43679 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.89□□□□□ -1.63
LDB2O43679 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.89□□□□□ -1.63
LDB2O43679 RPL6P9-201ENST00000466502 859 ntBASIC4.89□□□□□ -1.63
LDB2O43679 MTCO3P35-201ENST00000485582 781 ntBASIC4.89□□□□□ -1.63
LDB2O43679 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.89□□□□□ -1.63
LDB2O43679 RPS27AP16-201ENST00000492222 470 ntBASIC4.89□□□□□ -1.63
LDB2O43679 MTND4LP2-201ENST00000502312 285 ntBASIC4.89□□□□□ -1.63
LDB2O43679 MTCYBP35-201ENST00000503630 1137 ntBASIC4.89□□□□□ -1.63
LDB2O43679 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.89□□□□□ -1.63
LDB2O43679 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.89□□□□□ -1.63
LDB2O43679 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.89□□□□□ -1.63
LDB2O43679 RNA5SP249-201ENST00000516127 99 ntBASIC4.89□□□□□ -1.63
LDB2O43679 RNU6-1028P-201ENST00000517164 93 ntBASIC4.89□□□□□ -1.63
LDB2O43679 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LDB2O43679 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.89□□□□□ -1.63
LDB2O43679 GCSHP4-201ENST00000538792 439 ntBASIC4.89□□□□□ -1.63
LDB2O43679 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.89□□□□□ -1.63
LDB2O43679 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.89□□□□□ -1.63
LDB2O43679 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.89□□□□□ -1.63
LDB2O43679 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.89□□□□□ -1.63
LDB2O43679 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.89□□□□□ -1.63
LDB2O43679 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.89□□□□□ -1.63
LDB2O43679 MIR3934-201ENST00000579806 107 ntBASIC4.89□□□□□ -1.63
LDB2O43679 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.89□□□□□ -1.63
LDB2O43679 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.89□□□□□ -1.63
LDB2O43679 AC113368.1-201ENST00000603736 382 ntBASIC4.89□□□□□ -1.63
LDB2O43679 AC012557.1-201ENST00000607115 611 ntBASIC4.89□□□□□ -1.63
LDB2O43679 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.89□□□□□ -1.63
LDB2O43679 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.89□□□□□ -1.63
LDB2O43679 AP001521.2-201ENST00000608772 546 ntBASIC4.89□□□□□ -1.63
LDB2O43679 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.89□□□□□ -1.63
LDB2O43679 AC017104.5-201ENST00000637647 639 ntBASIC4.89□□□□□ -1.63
LDB2O43679 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDB2O43679 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LDB2O43679 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LDB2O43679 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.89□□□□□ -1.63
LDB2O43679 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LDB2O43679 AC099654.2-201ENST00000433031 1980 ntBASIC4.89□□□□□ -1.63
LDB2O43679 AC000374.1-201ENST00000434698 1745 ntBASIC4.89□□□□□ -1.63
LDB2O43679 AC099786.3-201ENST00000565735 1410 ntBASIC4.89□□□□□ -1.63
LDB2O43679 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.88□□□□□ -1.63
LDB2O43679 HSPA8P14-201ENST00000552265 1805 ntBASIC4.88□□□□□ -1.63
LDB2O43679 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LDB2O43679 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 AC008549.2-201ENST00000333482 706 ntBASIC4.88□□□□□ -1.63
LDB2O43679 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LDB2O43679 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LDB2O43679 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LDB2O43679 U6.112-201ENST00000384129 70 ntBASIC4.88□□□□□ -1.63
LDB2O43679 MT-TP-201ENST00000387461 68 ntBASIC4.88□□□□□ -1.63
LDB2O43679 CHEK2P3-201ENST00000416118 248 ntBASIC4.88□□□□□ -1.63
LDB2O43679 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.88□□□□□ -1.63
LDB2O43679 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.88□□□□□ -1.63
LDB2O43679 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.88□□□□□ -1.63
LDB2O43679 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 CALM1P2-201ENST00000452941 448 ntBASIC4.88□□□□□ -1.63
LDB2O43679 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.88□□□□□ -1.63
LDB2O43679 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 GTF2IP12-201ENST00000456547 356 ntBASIC4.88□□□□□ -1.63
LDB2O43679 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.88□□□□□ -1.63
LDB2O43679 RPS4XP6-201ENST00000477670 797 ntBASIC4.88□□□□□ -1.63
LDB2O43679 AC090686.1-201ENST00000481577 749 ntBASIC4.88□□□□□ -1.63
LDB2O43679 RPL21P131-201ENST00000497298 483 ntBASIC4.88□□□□□ -1.63
LDB2O43679 RN7SL558P-201ENST00000497468 299 ntBASIC4.88□□□□□ -1.63
LDB2O43679 HMGB3P16-201ENST00000508037 287 ntBASIC4.88□□□□□ -1.63
LDB2O43679 AC093752.1-206ENST00000511823 336 ntBASIC4.88□□□□□ -1.63
LDB2O43679 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.88□□□□□ -1.63
LDB2O43679 AC119751.5-201ENST00000514077 770 ntBASIC4.88□□□□□ -1.63
LDB2O43679 FTH1P11-201ENST00000517577 551 ntBASIC4.88□□□□□ -1.63
LDB2O43679 OR5AZ1P-201ENST00000527448 943 ntBASIC4.88□□□□□ -1.63
LDB2O43679 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.88□□□□□ -1.63
LDB2O43679 OR5D15P-201ENST00000531671 942 ntBASIC4.88□□□□□ -1.63
LDB2O43679 AC011611.5-201ENST00000552477 578 ntBASIC4.88□□□□□ -1.63
LDB2O43679 AL049839.1-201ENST00000556151 657 ntBASIC4.88□□□□□ -1.63
LDB2O43679 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.88□□□□□ -1.63
LDB2O43679 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.88□□□□□ -1.63
LDB2O43679 AC245036.5-201ENST00000596330 847 ntBASIC4.88□□□□□ -1.63
LDB2O43679 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms