Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 RN7SKP55-201ENST00000364888 307 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 Y_RNA.387-201ENST00000383918 102 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 HMGB3P7-201ENST00000400214 611 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 RNU2-9P-201ENST00000410194 145 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 RN7SKP271-201ENST00000410528 320 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AL133384.1-201ENST00000412744 351 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC004987.3-201ENST00000413879 771 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 MTND4LP17-201ENST00000414607 293 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 HIGD1AP16-201ENST00000450986 258 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 RNU7-63P-201ENST00000459054 62 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 APOOP2-201ENST00000461561 539 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 MRPS17P3-201ENST00000465453 385 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 RPS4XP18-201ENST00000495480 763 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC108693.1-201ENST00000496068 432 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 IGLVIV-64-201ENST00000518581 301 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 SOD1P3-201ENST00000518682 454 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC107953.1-201ENST00000522216 297 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 HMGB1P42-201ENST00000532126 553 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 FXNP1-201ENST00000555153 337 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 MIR1273F-201ENST00000580581 99 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AL031777.2-201ENST00000611953 196 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AL354950.2-201ENST00000617939 290 ntBASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHGA11Q9Y5H2 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 MTND4P35-201ENST00000604257 1375 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AC092125.1-201ENST00000562568 1995 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AC023886.2-201ENST00000321285 411 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 RPL7P26-201ENST00000333817 754 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 RNU6-853P-201ENST00000364306 107 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 SNORA70.5-201ENST00000365519 135 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 MIR548P-201ENST00000408336 84 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 RN7SKP39-201ENST00000410773 322 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AL807761.1-201ENST00000417622 171 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 SUMO2P4-201ENST00000504193 276 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 RN7SKP13-201ENST00000515933 244 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AL352979.3-201ENST00000553515 247 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AC093249.1-201ENST00000567049 203 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 MIR4685-201ENST00000578185 69 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 SNORA70D-201ENST00000578836 135 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 MIR3118-1-201ENST00000581787 76 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms