Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC068538.1-201ENST00000376856 336 ntBASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 AC019155.1-201ENST00000382242 574 ntBASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 RNU4-25P-201ENST00000410569 230 ntBASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 RPL7AP28-201ENST00000464513 571 ntBASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 RN7SL385P-201ENST00000468873 276 ntBASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 AC011276.1-201ENST00000469688 323 ntBASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 AC093840.1-201ENST00000511599 336 ntBASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 NPM1P6-201ENST00000521088 871 ntBASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 OR2L1P-202ENST00000641567 1023 ntBASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 AC017104.4-201ENST00000636283 1592 ntBASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLIP2Q9UDT6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AC125257.1-201ENST00000560400 2930 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 HSPD1P14-201ENST00000432666 1618 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 TMSB10P2-201ENST00000416049 131 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 Z74021.1-201ENST00000423610 407 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AC113430.1-201ENST00000506872 718 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 OR8G5-201ENST00000524943 1041 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 SLC25A36P1-201ENST00000590111 465 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 MLECP1-201ENST00000615893 709 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AC107905.1-201ENST00000616204 426 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 LINC00901.1-201ENST00000617252 152 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AC011944.2-201ENST00000624440 683 ntBASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
CLIP2Q9UDT6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 MT-RNR1-201ENST00000389680 954 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 MIR921-201ENST00000401133 56 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 VDAC1P9-201ENST00000412766 841 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 RCC2P2-201ENST00000422174 918 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AC023141.6-201ENST00000429418 337 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 CBX1P1-201ENST00000440184 427 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 FHP1-201ENST00000442741 703 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AL133244.1-201ENST00000456007 258 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 RPL23AP24-201ENST00000458203 385 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 ATP5G1P3-201ENST00000463301 410 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 RN7SL41P-201ENST00000476144 297 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 RPS27AP16-201ENST00000492222 470 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AC015912.2-201ENST00000571053 181 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AC090948.1-201ENST00000607464 549 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AC020634.1-201ENST00000608701 549 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AL731566.2-201ENST00000618971 317 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 CCT8P1-201ENST00000413611 1657 ntBASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP2Q9UDT6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms