Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 MIR595-201ENST00000384905 96 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 SNORA68.2-201ENST00000391263 128 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 RN7SKP159-201ENST00000410657 292 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 ASS1P5-201ENST00000435496 1239 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC007790.1-201ENST00000439081 782 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 MTND6P15-201ENST00000441157 521 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 RPL37P6-202ENST00000464216 403 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC106774.1-201ENST00000515105 321 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC005479.1-201ENST00000554629 451 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC018554.2-201ENST00000563482 261 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC007663.4-201ENST00000608275 631 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC135507.2-201ENST00000612443 309 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AL391987.5-201ENST00000618472 412 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AL136313.1-201ENST00000624804 202 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AC005618.1-201ENST00000606901 3148 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 TAB3P1-202ENST00000452645 1634 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 SNORA73A-201ENST00000364938 206 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 RNU6-1029P-201ENST00000384109 107 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 RNU6-1013P-201ENST00000384180 107 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 SNORA14B-201ENST00000384452 135 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 PUDPP1-201ENST00000421058 495 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AL645937.1-202ENST00000421799 937 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC005517.2-201ENST00000424673 553 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC005534.2-201ENST00000431047 433 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AL772284.1-201ENST00000443421 905 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 MRPL48P1-201ENST00000445390 636 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AL034397.1-201ENST00000456392 908 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 RN7SL464P-201ENST00000492743 297 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC004062.1-201ENST00000509926 645 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 KRT18P54-201ENST00000513396 748 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 RNU6-1092P-201ENST00000516955 87 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AP003532.1-201ENST00000529936 310 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC023827.2-201ENST00000566880 1061 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AL355375.2-201ENST00000574825 175 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC025198.1-201ENST00000578331 419 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC127024.5-201ENST00000580085 462 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 MIR4742-201ENST00000581069 85 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 JPT1-211ENST00000581874 517 ntTSL 5 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AL022099.1-201ENST00000604551 712 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC133644.2-201ENST00000608142 540 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC104237.2-201ENST00000612456 443 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 SNHG22-203ENST00000617833 660 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC239859.6-201ENST00000622095 213 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC099667.1-201ENST00000624222 469 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 AC073488.11-201ENST00000633298 754 ntBASIC8.88□□□□□ -0.99
RTN4Q9NQC3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms