Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC112503.1-201ENST00000608436 391 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AC007275.1-201ENST00000621243 671 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AP000770.2-201ENST00000623694 100 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 CR381572.2-201ENST00000624852 397 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 TLK1P1-201ENST00000456760 2440 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 RNU6-1005P-201ENST00000384519 107 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 RNA5SP105-201ENST00000391123 113 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 ATF1P1-201ENST00000406040 927 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AL080315.1-201ENST00000406055 466 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AL445183.3-201ENST00000414168 502 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 LINC00993-201ENST00000420453 540 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 MTCO2P23-201ENST00000425216 680 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AL160175.1-201ENST00000428124 247 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 FO393414.1-201ENST00000428697 1184 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 VN1R54P-201ENST00000435210 1049 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 MTCYBP29-201ENST00000436327 1006 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 HMGB1P26-201ENST00000452520 628 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC008379.1-201ENST00000463655 464 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 RPL23AP37-201ENST00000479658 549 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 RN7SL591P-201ENST00000496150 292 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 TRAV31-201ENST00000502780 342 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 GAPDHP56-201ENST00000506031 988 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC021006.3-201ENST00000530771 192 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC107918.3-201ENST00000533272 382 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 EDDM3DP-201ENST00000554692 434 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AL049838.1-201ENST00000563647 981 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC093249.4-201ENST00000564755 259 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC008507.2-201ENST00000588402 1176 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC011492.1-201ENST00000600023 315 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC130352.1-201ENST00000602979 661 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 COX6CP4-201ENST00000605798 228 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC018754.1-201ENST00000607486 925 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC084824.4-201ENST00000620106 731 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC126544.2-201ENST00000625174 749 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC008993.2-201ENST00000631744 806 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 AC021242.1-201ENST00000507315 2035 ntBASIC4.92□□□□□ -1.62
PCDH9Q9HC56 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH9Q9HC56 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 RN7SKP224-201ENST00000364140 325 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 RNU6-354P-201ENST00000383862 107 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 RNU6-610P-201ENST00000384264 107 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 SNORD96B-201ENST00000386148 79 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 COX6B1P1-201ENST00000415962 213 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AC004854.1-201ENST00000440356 349 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 RPL7P61-201ENST00000451721 751 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 OFD1P3Y-201ENST00000453312 783 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 HSPE1P22-201ENST00000456856 327 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH9Q9HC56 RPL7P16-201ENST00000479738 738 ntBASIC4.91□□□□□ -1.62
PCDH9Q9HC56 RPS4XP18-201ENST00000495480 763 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms