Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 AC005005.4-201ENST00000623789 16698 ntBASIC6.44□□□□□ -1.38
SCAPERQ9BY12 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 AP001642.1-201ENST00000624727 2117 ntBASIC6.44□□□□□ -1.38
SCAPERQ9BY12 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 AC000374.1-201ENST00000434698 1745 ntBASIC6.43□□□□□ -1.38
SCAPERQ9BY12 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 AC016588.2-201ENST00000632484 3021 ntBASIC6.43□□□□□ -1.38
SCAPERQ9BY12 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 AC022336.1-201ENST00000475510 337 ntBASIC6.43□□□□□ -1.38
SCAPERQ9BY12 RNA5SP249-201ENST00000516127 99 ntBASIC6.43□□□□□ -1.38
SCAPERQ9BY12 SCARNA13-201ENST00000516672 275 ntBASIC6.43□□□□□ -1.38
SCAPERQ9BY12 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 AC091178.1-203ENST00000584586 279 ntBASIC6.43□□□□□ -1.38
SCAPERQ9BY12 AP002360.3-201ENST00000607673 710 ntBASIC6.43□□□□□ -1.38
SCAPERQ9BY12 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 AP001157.1-201ENST00000550837 2339 ntBASIC6.43□□□□□ -1.38
SCAPERQ9BY12 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCAPERQ9BY12 RNU4-6P-201ENST00000410804 122 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 RNA5SP360-201ENST00000516555 118 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AP000889.1-201ENST00000530968 660 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 BNIP3P19-201ENST00000605397 577 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 PCA3_2.1-201ENST00000612507 409 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 MAPK10-372ENST00000641954 3413 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AL022322.2-201ENST00000624072 20397 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AL022393.1-201ENST00000625142 1677 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 MIR7-3-201ENST00000384898 110 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 RN7SKP97-201ENST00000410966 333 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 SERPINA7P1-201ENST00000443077 631 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 DDX39BP2-208ENST00000453923 258 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 ATP5G1P3-201ENST00000463301 410 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AF213884.1-201ENST00000488102 463 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 HMGB3P16-201ENST00000508037 287 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AP000619.3-201ENST00000535634 1127 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AC120057.2-201ENST00000571520 271 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AL160290.3-201ENST00000604869 165 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AC012314.7-201ENST00000619693 93 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 AC020978.9-201ENST00000624380 1141 ntBASIC6.42□□□□□ -1.38
SCAPERQ9BY12 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.42□□□□□ -1.38
SCAPERQ9BY12 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 MAPK10-349ENST00000641767 3661 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 EIF3EP2-201ENST00000423042 1814 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 SNORA11.2-201ENST00000408318 127 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 MIR1271-201ENST00000408537 86 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AC062016.2-201ENST00000420950 676 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.41□□□□□ -1.38
SCAPERQ9BY12 RPS4XP12-201ENST00000461747 709 ntBASIC6.41□□□□□ -1.38
SCAPERQ9BY12 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms