Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC090515.3-201ENST00000560431 315 ntBASIC6□□□□□ -1.45
CCDC7Q96M83 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC7Q96M83 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6□□□□□ -1.45
CCDC7Q96M83 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6□□□□□ -1.45
CCDC7Q96M83 AC090506.2-201ENST00000624521 419 ntBASIC6□□□□□ -1.45
CCDC7Q96M83 AL139254.3-201ENST00000641097 674 ntBASIC6□□□□□ -1.45
CCDC7Q96M83 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC7Q96M83 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCDC7Q96M83 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC7Q96M83 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC7Q96M83 AC006484.1-201ENST00000435086 1884 ntBASIC6□□□□□ -1.45
CCDC7Q96M83 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC6□□□□□ -1.45
CCDC7Q96M83 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6□□□□□ -1.45
CCDC7Q96M83 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC7Q96M83 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC7Q96M83 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC7Q96M83 RNU1-132P-201ENST00000364300 164 ntBASIC5.99□□□□□ -1.45
CCDC7Q96M83 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 OR13Z1P-201ENST00000416141 834 ntBASIC5.99□□□□□ -1.45
CCDC7Q96M83 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 RCC2P2-201ENST00000422174 918 ntBASIC5.99□□□□□ -1.45
CCDC7Q96M83 AL132765.1-201ENST00000434165 553 ntBASIC5.99□□□□□ -1.45
CCDC7Q96M83 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC7Q96M83 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 AC034236.1-201ENST00000469891 373 ntBASIC5.99□□□□□ -1.45
CCDC7Q96M83 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 OR5D2P-201ENST00000524390 911 ntBASIC5.99□□□□□ -1.45
CCDC7Q96M83 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 AC006064.5-201ENST00000541782 248 ntBASIC5.99□□□□□ -1.45
CCDC7Q96M83 AP003497.2-201ENST00000624220 967 ntBASIC5.99□□□□□ -1.45
CCDC7Q96M83 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC7Q96M83 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC7Q96M83 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
CCDC7Q96M83 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC7Q96M83 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC7Q96M83 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC7Q96M83 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC7Q96M83 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
CCDC7Q96M83 SPRR2C-201ENST00000290702 219 ntBASIC5.98□□□□□ -1.45
CCDC7Q96M83 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC7Q96M83 RNU6-316P-201ENST00000391027 107 ntBASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC073335.1-201ENST00000427776 363 ntBASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC022034.3-201ENST00000471393 478 ntBASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC7Q96M83 PHBP17-201ENST00000528576 541 ntBASIC5.98□□□□□ -1.45
CCDC7Q96M83 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC7Q96M83 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC022916.3-201ENST00000592961 742 ntBASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC099676.1-201ENST00000608886 657 ntBASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC010809.3-201ENST00000621310 641 ntBASIC5.98□□□□□ -1.45
CCDC7Q96M83 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC7Q96M83 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC120036.2-201ENST00000509729 1474 ntBASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC7Q96M83 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC7Q96M83 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC7Q96M83 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 AP002812.1-201ENST00000495378 474 ntBASIC5.97□□□□□ -1.45
CCDC7Q96M83 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 MTND6P33-201ENST00000571794 183 ntBASIC5.97□□□□□ -1.45
CCDC7Q96M83 AL031666.3-201ENST00000609320 1006 ntBASIC5.97□□□□□ -1.45
CCDC7Q96M83 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC7Q96M83 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC7Q96M83 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC7Q96M83 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC7Q96M83 OR51C1P-202ENST00000641159 1444 ntBASIC5.97□□□□□ -1.45
CCDC7Q96M83 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC7Q96M83 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC7Q96M83 RNU1-15P-201ENST00000353977 144 ntBASIC5.96□□□□□ -1.45
CCDC7Q96M83 RNA5SP175-201ENST00000364275 119 ntBASIC5.96□□□□□ -1.45
CCDC7Q96M83 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.96□□□□□ -1.45
CCDC7Q96M83 EIF4A1P3-201ENST00000411521 244 ntBASIC5.96□□□□□ -1.45
CCDC7Q96M83 RPL23AP38-201ENST00000423801 469 ntBASIC5.96□□□□□ -1.45
CCDC7Q96M83 COX6CP15-201ENST00000426313 211 ntBASIC5.96□□□□□ -1.45
CCDC7Q96M83 DYNLL1P7-201ENST00000429273 258 ntBASIC5.96□□□□□ -1.45
CCDC7Q96M83 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.96□□□□□ -1.45
CCDC7Q96M83 PARP4P3-201ENST00000510265 317 ntBASIC5.96□□□□□ -1.45
CCDC7Q96M83 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC7Q96M83 RNA5SP360-201ENST00000516555 118 ntBASIC5.96□□□□□ -1.45
CCDC7Q96M83 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.96□□□□□ -1.45
CCDC7Q96M83 AC233702.9-201ENST00000581528 203 ntBASIC5.96□□□□□ -1.45
CCDC7Q96M83 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.96□□□□□ -1.45
CCDC7Q96M83 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.96□□□□□ -1.45
CCDC7Q96M83 TMEM30CP-203ENST00000637814 1035 ntBASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms