Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RPL36AP13-201ENST00000457490 317 ntBASIC6.93□□□□□ -1.3
TOPBP1Q92547 CAB39P1-201ENST00000502277 460 ntBASIC6.93□□□□□ -1.3
TOPBP1Q92547 BNIP3P41-201ENST00000503774 571 ntBASIC6.93□□□□□ -1.3
TOPBP1Q92547 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.93□□□□□ -1.3
TOPBP1Q92547 AC107016.1-201ENST00000550463 337 ntBASIC6.93□□□□□ -1.3
TOPBP1Q92547 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.93□□□□□ -1.3
TOPBP1Q92547 AL049634.3-201ENST00000604968 457 ntBASIC6.93□□□□□ -1.3
TOPBP1Q92547 COX6CP4-201ENST00000605798 228 ntBASIC6.93□□□□□ -1.3
TOPBP1Q92547 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOPBP1Q92547 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOPBP1Q92547 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TOPBP1Q92547 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC6.93□□□□□ -1.3
TOPBP1Q92547 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC6.93□□□□□ -1.3
TOPBP1Q92547 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.93□□□□□ -1.3
TOPBP1Q92547 AC073136.1-201ENST00000449426 2884 ntBASIC6.93□□□□□ -1.3
TOPBP1Q92547 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOPBP1Q92547 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TOPBP1Q92547 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOPBP1Q92547 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.92□□□□□ -1.3
TOPBP1Q92547 RPL5P2-201ENST00000429598 854 ntBASIC6.92□□□□□ -1.3
TOPBP1Q92547 AC104978.1-201ENST00000449387 391 ntBASIC6.92□□□□□ -1.3
TOPBP1Q92547 FCF1P7-201ENST00000451185 558 ntBASIC6.92□□□□□ -1.3
TOPBP1Q92547 RN7SL323P-201ENST00000494712 295 ntBASIC6.92□□□□□ -1.3
TOPBP1Q92547 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TOPBP1Q92547 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.92□□□□□ -1.3
TOPBP1Q92547 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.92□□□□□ -1.3
TOPBP1Q92547 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.92□□□□□ -1.3
TOPBP1Q92547 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
TOPBP1Q92547 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.92□□□□□ -1.3
TOPBP1Q92547 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOPBP1Q92547 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TOPBP1Q92547 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
TOPBP1Q92547 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
TOPBP1Q92547 ERCC6-202ENST00000374127 1782 ntBASIC6.92□□□□□ -1.3
TOPBP1Q92547 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
TOPBP1Q92547 PCAT14-202ENST00000627127 3935 ntBASIC6.92□□□□□ -1.3
TOPBP1Q92547 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TOPBP1Q92547 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
TOPBP1Q92547 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC104623.2-202ENST00000623477 4002 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 AL159987.2-201ENST00000432754 307 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC108145.1-201ENST00000503770 153 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC026427.2-201ENST00000506228 536 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC074250.1-201ENST00000511117 192 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOPBP1Q92547 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC021242.1-201ENST00000507315 2035 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOPBP1Q92547 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC092647.1-201ENST00000420654 287 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 PPIAP3-201ENST00000450588 505 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 CYCSP30-201ENST00000546447 172 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC037471.2-201ENST00000564941 598 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.91□□□□□ -1.3
TOPBP1Q92547 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOPBP1Q92547 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOPBP1Q92547 AC005858.4-201ENST00000623191 700 ntBASIC6.91□□□□□ -1.3
TOPBP1Q92547 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOPBP1Q92547 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
TOPBP1Q92547 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOPBP1Q92547 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TOPBP1Q92547 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TOPBP1Q92547 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TOPBP1Q92547 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TOPBP1Q92547 SNX18P3-202ENST00000565670 1750 ntBASIC6.9□□□□□ -1.3
TOPBP1Q92547 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TOPBP1Q92547 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TOPBP1Q92547 Z92545.1-201ENST00000411782 234 ntBASIC6.9□□□□□ -1.31
TOPBP1Q92547 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.9□□□□□ -1.31
TOPBP1Q92547 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.9□□□□□ -1.31
TOPBP1Q92547 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.9□□□□□ -1.31
TOPBP1Q92547 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.9□□□□□ -1.31
TOPBP1Q92547 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.9□□□□□ -1.31
TOPBP1Q92547 IMMP1LP1-201ENST00000605170 488 ntBASIC6.9□□□□□ -1.31
TOPBP1Q92547 AC016957.2-201ENST00000616998 848 ntBASIC6.9□□□□□ -1.31
TOPBP1Q92547 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TOPBP1Q92547 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TOPBP1Q92547 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TOPBP1Q92547 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TOPBP1Q92547 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
TOPBP1Q92547 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOPBP1Q92547 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOPBP1Q92547 SNORD66.1-201ENST00000391230 76 ntBASIC6.89□□□□□ -1.31
TOPBP1Q92547 AC245052.5-201ENST00000416320 649 ntBASIC6.89□□□□□ -1.31
TOPBP1Q92547 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.89□□□□□ -1.31
TOPBP1Q92547 AL358472.1-201ENST00000431295 329 ntBASIC6.89□□□□□ -1.31
TOPBP1Q92547 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.89□□□□□ -1.31
TOPBP1Q92547 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC6.89□□□□□ -1.31
TOPBP1Q92547 HMGN1P15-201ENST00000513870 295 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms