Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 BX510359.1-201ENST00000456973 237 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC091167.4-201ENST00000605079 184 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 RNU2-65P-201ENST00000410162 185 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 RPL7P1-201ENST00000468161 747 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 RANP9-201ENST00000519957 271 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC005520.3-201ENST00000602874 370 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AP001284.1-201ENST00000528393 2118 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 RPL12P46-201ENST00000436610 195 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 AC127537.2-201ENST00000439258 465 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 AC015726.1-201ENST00000602353 681 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 IMMP1LP1-201ENST00000605170 488 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 AP001002.2-201ENST00000625137 386 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 AL133383.2-201ENST00000622958 2336 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 OR6K3-202ENST00000368146 996 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 RPS7P15-201ENST00000415804 584 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 RPL23AP12-201ENST00000467573 473 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 FTH1P9-201ENST00000513251 355 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 RPL6P9-201ENST00000466502 859 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 RN7SL812P-201ENST00000493791 279 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 ZNF962P-201ENST00000443465 3140 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 AC022417.1-201ENST00000624768 1303 ntBASIC3.31□□□□□ -1.88
VPS13CQ709C8 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VPS13CQ709C8 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS13CQ709C8 AL591135.1-201ENST00000401578 5914 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC020914.6-201ENST00000594327 272 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 QTRT1P1-201ENST00000604344 1078 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 AL137849.1-201ENST00000604767 169 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 U3.45-201ENST00000607547 219 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC073530.2-201ENST00000623987 261 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC074029.4-201ENST00000624796 1859 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS13CQ709C8 LINC01109-201ENST00000603837 3081 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS13CQ709C8 RNU1-33P-201ENST00000364249 162 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 FCF1P7-201ENST00000451185 558 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 RPS26P28-201ENST00000470806 348 ntBASIC3.3□□□□□ -1.88
VPS13CQ709C8 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms