Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MTCYBP23-201ENST00000558717 1102 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 SNORD95-201ENST00000579879 68 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC009597.2-201ENST00000604659 592 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC037198.3-201ENST00000616754 526 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC111188.2-201ENST00000529697 1387 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 AL049737.1-201ENST00000413920 1403 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC38Q502W7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC38Q502W7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC38Q502W7 Z95327.2-201ENST00000414579 1873 ntBASIC5.37□□□□□ -1.55
CCDC38Q502W7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 RNA5SP335-201ENST00000363817 110 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 HSPA8P15-201ENST00000401676 786 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 GTF2IP3-201ENST00000433887 494 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 AC234064.1-201ENST00000436312 247 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 BX842559.2-201ENST00000451418 605 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 RN7SL515P-201ENST00000463999 297 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 RN7SL547P-201ENST00000490793 290 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 RN7SL101P-201ENST00000496350 279 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 RN7SL466P-201ENST00000497546 295 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 AC008494.2-201ENST00000514544 370 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 MTND2P32-201ENST00000521584 1038 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 AP001372.4-201ENST00000524889 472 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 RN7SL52P-201ENST00000584271 284 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 MTCO2P2-201ENST00000591258 225 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 PCNAP1-202ENST00000595299 752 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 AC005252.1-201ENST00000604518 1063 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 AL355816.2-201ENST00000610049 647 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 AP000894.4-201ENST00000610185 483 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 PART1_2.1-201ENST00000612397 250 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 AL353726.1-201ENST00000614041 1000 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 VN1R7P-201ENST00000619242 903 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 MIR8080-201ENST00000622224 89 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC38Q502W7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC38Q502W7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 CASC19-204ENST00000641001 2055 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 SMG1P6-201ENST00000532337 2930 ntBASIC5.36□□□□□ -1.55
CCDC38Q502W7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC38Q502W7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC38Q502W7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC38Q502W7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC38Q502W7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC38Q502W7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC126323.6-202ENST00000568092 3511 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AL451142.2-201ENST00000429076 2090 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 MTCO1P11-201ENST00000429111 1528 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AL512646.1-201ENST00000269395 1077 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 SNORA51.1-201ENST00000363243 140 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 RNA5SP223-201ENST00000365174 120 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 BMS1P3-201ENST00000372011 932 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC38Q502W7 Y_RNA.578-201ENST00000390903 88 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 MTCO1P56-201ENST00000401674 224 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AL512422.1-201ENST00000407033 553 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 RPL36AP10-201ENST00000421785 322 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AL009174.1-201ENST00000426577 416 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 TXNP5-201ENST00000441043 315 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 MTCYBP42-201ENST00000444653 1130 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC073587.1-201ENST00000447093 876 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AL645937.3-201ENST00000453647 936 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 PPIAP21-201ENST00000464473 501 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC073358.1-201ENST00000505671 684 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC38Q502W7 HMGB3P16-201ENST00000508037 287 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 RNU6-416P-201ENST00000516265 103 ntBASIC5.35□□□□□ -1.55
CCDC38Q502W7 SCARNA21.2-201ENST00000516600 166 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms