Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC004944.1-201ENST00000517807 3059 ntBASIC2.54□□□□□ -2
HSPG2P98160 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC2.54□□□□□ -2
HSPG2P98160 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 U3.26-201ENST00000391236 204 ntBASIC2.54□□□□□ -2
HSPG2P98160 AC093719.1-202ENST00000392735 373 ntBASIC2.54□□□□□ -2
HSPG2P98160 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.54□□□□□ -2
HSPG2P98160 AC017015.1-201ENST00000477387 286 ntBASIC2.54□□□□□ -2
HSPG2P98160 AC069304.1-201ENST00000491593 704 ntBASIC2.54□□□□□ -2
HSPG2P98160 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.54□□□□□ -2
HSPG2P98160 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.54□□□□□ -2
HSPG2P98160 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.54□□□□□ -2
HSPG2P98160 MIR7112-201ENST00000616126 65 ntBASIC2.54□□□□□ -2
HSPG2P98160 OR8G7P-201ENST00000616658 848 ntBASIC2.54□□□□□ -2
HSPG2P98160 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC2.54□□□□□ -2
HSPG2P98160 AL034370.1-201ENST00000397254 1590 ntBASIC2.54□□□□□ -2
HSPG2P98160 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HSPG2P98160 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HSPG2P98160 SNORA48.5-201ENST00000391143 135 ntBASIC2.54□□□□□ -2
HSPG2P98160 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.54□□□□□ -2
HSPG2P98160 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.54□□□□□ -2
HSPG2P98160 SERPINA7P1-201ENST00000443077 631 ntBASIC2.54□□□□□ -2
HSPG2P98160 RPL7P22-201ENST00000466005 733 ntBASIC2.54□□□□□ -2
HSPG2P98160 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC2.54□□□□□ -2
HSPG2P98160 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.54□□□□□ -2
HSPG2P98160 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.54□□□□□ -2
HSPG2P98160 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC2.54□□□□□ -2
HSPG2P98160 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
HSPG2P98160 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.54□□□□□ -2
HSPG2P98160 MIR1251-201ENST00000408552 70 ntBASIC2.54□□□□□ -2
HSPG2P98160 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC2.54□□□□□ -2
HSPG2P98160 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.54□□□□□ -2
HSPG2P98160 AC005326.1-201ENST00000429197 123 ntBASIC2.54□□□□□ -2
HSPG2P98160 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HSPG2P98160 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.54□□□□□ -2
HSPG2P98160 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.54□□□□□ -2
HSPG2P98160 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.54□□□□□ -2
HSPG2P98160 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.54□□□□□ -2
HSPG2P98160 AL352979.3-201ENST00000553515 247 ntBASIC2.54□□□□□ -2
HSPG2P98160 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.54□□□□□ -2
HSPG2P98160 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC2.54□□□□□ -2
HSPG2P98160 BDH2P1-201ENST00000602288 736 ntBASIC2.54□□□□□ -2
HSPG2P98160 AC008833.1-201ENST00000611633 691 ntBASIC2.54□□□□□ -2
HSPG2P98160 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HSPG2P98160 DDX18P5-201ENST00000534547 1306 ntBASIC2.54□□□□□ -2
HSPG2P98160 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 MTCO1P46-201ENST00000451639 1491 ntBASIC2.53□□□□□ -2
HSPG2P98160 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC2.53□□□□□ -2
HSPG2P98160 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.53□□□□□ -2
HSPG2P98160 RNU2-65P-201ENST00000410162 185 ntBASIC2.53□□□□□ -2
HSPG2P98160 TCEA1P2-201ENST00000420496 906 ntBASIC2.53□□□□□ -2
HSPG2P98160 CKS1BP6-201ENST00000424932 240 ntBASIC2.53□□□□□ -2
HSPG2P98160 AL591503.2-201ENST00000442314 1005 ntBASIC2.53□□□□□ -2
HSPG2P98160 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC2.53□□□□□ -2
HSPG2P98160 AC037198.2-201ENST00000478845 733 ntBASIC2.53□□□□□ -2
HSPG2P98160 AC027309.2-201ENST00000520566 192 ntBASIC2.53□□□□□ -2
HSPG2P98160 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 MIR3922-201ENST00000585192 84 ntBASIC2.53□□□□□ -2
HSPG2P98160 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.53□□□□□ -2
HSPG2P98160 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.53□□□□□ -2
HSPG2P98160 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC2.53□□□□□ -2
HSPG2P98160 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
HSPG2P98160 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 BBX-203ENST00000402543 3980 ntTSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC2.53□□□□□ -2
HSPG2P98160 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
HSPG2P98160 RNA5SP374-201ENST00000362939 125 ntBASIC2.53□□□□□ -2
HSPG2P98160 RNA5SP267-201ENST00000364893 126 ntBASIC2.53□□□□□ -2
HSPG2P98160 PEX12P1-201ENST00000400284 1048 ntBASIC2.53□□□□□ -2
HSPG2P98160 EIF4HP2-201ENST00000424380 563 ntBASIC2.53□□□□□ -2
HSPG2P98160 RPL5P2-201ENST00000429598 854 ntBASIC2.53□□□□□ -2
HSPG2P98160 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.53□□□□□ -2
HSPG2P98160 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC2.53□□□□□ -2
HSPG2P98160 RPS4XP12-201ENST00000461747 709 ntBASIC2.53□□□□□ -2
HSPG2P98160 FTH1P24-201ENST00000503502 462 ntBASIC2.53□□□□□ -2
HSPG2P98160 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.53□□□□□ -2
HSPG2P98160 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms