Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 SCARNA15.1-201ENST00000516384 125 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.83□□□□□ -1.48
YBX1P67809 IGKV3D-34-201ENST00000522638 302 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AP001804.2-201ENST00000533932 910 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.83□□□□□ -1.48
YBX1P67809 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 CR383656.6-201ENST00000550518 394 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 PSMB7P1-201ENST00000556349 514 ntBASIC5.83□□□□□ -1.48
YBX1P67809 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 PCMTD1P2-201ENST00000565017 355 ntBASIC5.83□□□□□ -1.48
YBX1P67809 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.83□□□□□ -1.48
YBX1P67809 AC010680.3-201ENST00000604215 520 ntBASIC5.83□□□□□ -1.48
YBX1P67809 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.83□□□□□ -1.48
YBX1P67809 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AL136228.1-201ENST00000622221 319 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AC006840.1-201ENST00000623069 542 ntBASIC5.83□□□□□ -1.48
YBX1P67809 AC009033.1-201ENST00000624279 431 ntBASIC5.83□□□□□ -1.48
YBX1P67809 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 BX284613.1-201ENST00000452221 1641 ntBASIC5.83□□□□□ -1.48
YBX1P67809 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
YBX1P67809 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
YBX1P67809 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
YBX1P67809 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.83□□□□□ -1.48
YBX1P67809 AL590763.1-201ENST00000398297 1545 ntBASIC5.83□□□□□ -1.48
YBX1P67809 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.83□□□□□ -1.48
YBX1P67809 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
YBX1P67809 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
YBX1P67809 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
YBX1P67809 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
YBX1P67809 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.82□□□□□ -1.48
YBX1P67809 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.82□□□□□ -1.48
YBX1P67809 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.82□□□□□ -1.48
YBX1P67809 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
YBX1P67809 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 TMSB4XP2-201ENST00000335179 210 ntBASIC5.82□□□□□ -1.48
YBX1P67809 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 RNU6-543P-201ENST00000362576 108 ntBASIC5.82□□□□□ -1.48
YBX1P67809 RNU6-501P-201ENST00000364072 100 ntBASIC5.82□□□□□ -1.48
YBX1P67809 RN7SKP78-201ENST00000364711 318 ntBASIC5.82□□□□□ -1.48
YBX1P67809 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.82□□□□□ -1.48
YBX1P67809 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.82□□□□□ -1.48
YBX1P67809 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
YBX1P67809 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.82□□□□□ -1.48
YBX1P67809 AL096800.1-201ENST00000405326 893 ntBASIC5.82□□□□□ -1.48
YBX1P67809 CCNG1P1-201ENST00000406783 885 ntBASIC5.82□□□□□ -1.48
YBX1P67809 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.82□□□□□ -1.48
YBX1P67809 RPL35AP3-201ENST00000414680 288 ntBASIC5.82□□□□□ -1.48
YBX1P67809 HMGB3P23-201ENST00000414981 585 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.82□□□□□ -1.48
YBX1P67809 PTP4A1P1-201ENST00000420539 515 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AC092647.1-201ENST00000420654 287 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AC009237.2-201ENST00000421358 284 ntBASIC5.82□□□□□ -1.48
YBX1P67809 DSTNP5-201ENST00000427921 523 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AL136231.1-201ENST00000429407 730 ntBASIC5.82□□□□□ -1.48
YBX1P67809 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.82□□□□□ -1.48
YBX1P67809 AC069154.1-201ENST00000432914 542 ntBASIC5.82□□□□□ -1.48
YBX1P67809 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.82□□□□□ -1.48
YBX1P67809 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.82□□□□□ -1.48
YBX1P67809 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.82□□□□□ -1.48
YBX1P67809 AC239367.2-201ENST00000447309 705 ntBASIC5.82□□□□□ -1.48
YBX1P67809 DPPA3P1-201ENST00000448050 469 ntBASIC5.82□□□□□ -1.48
YBX1P67809 PSPHP1-201ENST00000450062 261 ntBASIC5.82□□□□□ -1.48
YBX1P67809 RPL7P31-201ENST00000450192 724 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AC016027.4-201ENST00000450866 277 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AC013267.1-201ENST00000458227 267 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AC023194.2-201ENST00000465398 406 ntBASIC5.82□□□□□ -1.48
YBX1P67809 RN7SL269P-201ENST00000467795 305 ntBASIC5.82□□□□□ -1.48
YBX1P67809 ACTG1P13-201ENST00000486987 1043 ntBASIC5.82□□□□□ -1.48
YBX1P67809 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 SETP14-201ENST00000497538 873 ntBASIC5.82□□□□□ -1.48
YBX1P67809 DYNLL1P6-201ENST00000503440 264 ntBASIC5.82□□□□□ -1.48
YBX1P67809 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 RNU6-1225P-201ENST00000516336 65 ntBASIC5.82□□□□□ -1.48
YBX1P67809 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.82□□□□□ -1.48
YBX1P67809 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.82□□□□□ -1.48
YBX1P67809 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.82□□□□□ -1.48
YBX1P67809 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.82□□□□□ -1.48
YBX1P67809 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
YBX1P67809 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.82□□□□□ -1.48
YBX1P67809 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.82□□□□□ -1.48
YBX1P67809 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.82□□□□□ -1.48
YBX1P67809 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.82□□□□□ -1.48
YBX1P67809 AL138976.2-201ENST00000563989 694 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms