Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 Y_RNA.183-201ENST00000363882 113 ntBASIC8.39□□□□□ -1.07
ATN1P54259 RN7SKP208-201ENST00000365474 361 ntBASIC8.39□□□□□ -1.07
ATN1P54259 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ATN1P54259 AL583834.1-201ENST00000406943 343 ntBASIC8.39□□□□□ -1.07
ATN1P54259 RNU6-121P-201ENST00000410525 99 ntBASIC8.39□□□□□ -1.07
ATN1P54259 RNU6-394P-201ENST00000410735 107 ntBASIC8.39□□□□□ -1.07
ATN1P54259 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC8.39□□□□□ -1.07
ATN1P54259 RPS15AP30-201ENST00000420976 390 ntBASIC8.39□□□□□ -1.07
ATN1P54259 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.39□□□□□ -1.07
ATN1P54259 UBE2D3P2-201ENST00000424409 445 ntBASIC8.39□□□□□ -1.07
ATN1P54259 AC016027.5-201ENST00000427227 210 ntBASIC8.39□□□□□ -1.07
ATN1P54259 AC096632.1-201ENST00000427395 310 ntBASIC8.39□□□□□ -1.07
ATN1P54259 MED13P1-201ENST00000428342 171 ntBASIC8.39□□□□□ -1.07
ATN1P54259 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC8.39□□□□□ -1.07
ATN1P54259 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.39□□□□□ -1.07
ATN1P54259 CEACAMP7-201ENST00000444105 496 ntBASIC8.39□□□□□ -1.07
ATN1P54259 RPL31P44-201ENST00000447680 377 ntBASIC8.39□□□□□ -1.07
ATN1P54259 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC8.39□□□□□ -1.07
ATN1P54259 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.39□□□□□ -1.07
ATN1P54259 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC8.39□□□□□ -1.07
ATN1P54259 AC087477.1-201ENST00000465747 340 ntBASIC8.39□□□□□ -1.07
ATN1P54259 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC8.39□□□□□ -1.07
ATN1P54259 RPL7P6-201ENST00000480903 738 ntBASIC8.39□□□□□ -1.07
ATN1P54259 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ATN1P54259 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC8.39□□□□□ -1.07
ATN1P54259 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
ATN1P54259 AL022238.3-201ENST00000609279 443 ntBASIC8.39□□□□□ -1.07
ATN1P54259 AL391903.2-201ENST00000614532 247 ntBASIC8.39□□□□□ -1.07
ATN1P54259 AC007603.3-201ENST00000636915 979 ntBASIC8.39□□□□□ -1.07
ATN1P54259 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
ATN1P54259 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.39□□□□□ -1.07
ATN1P54259 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
ATN1P54259 AC009148.1-201ENST00000570148 2693 ntBASIC8.39□□□□□ -1.07
ATN1P54259 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ATN1P54259 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ATN1P54259 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
ATN1P54259 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
ATN1P54259 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
ATN1P54259 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
ATN1P54259 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
ATN1P54259 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
ATN1P54259 AC008985.1-201ENST00000624169 2239 ntBASIC8.38□□□□□ -1.07
ATN1P54259 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 AL109809.4-201ENST00000603520 2185 ntBASIC8.38□□□□□ -1.07
ATN1P54259 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 OR2A20P-201ENST00000479887 2913 ntBASIC8.38□□□□□ -1.07
ATN1P54259 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.38□□□□□ -1.07
ATN1P54259 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
ATN1P54259 HMGB1P20-201ENST00000402555 677 ntBASIC8.38□□□□□ -1.07
ATN1P54259 PRRC2CP1-201ENST00000404428 159 ntBASIC8.38□□□□□ -1.07
ATN1P54259 RN7SKP126-201ENST00000411143 300 ntBASIC8.38□□□□□ -1.07
ATN1P54259 RPS24P8-201ENST00000431490 402 ntBASIC8.38□□□□□ -1.07
ATN1P54259 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC8.38□□□□□ -1.07
ATN1P54259 AC002381.1-201ENST00000447049 280 ntBASIC8.38□□□□□ -1.07
ATN1P54259 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC8.38□□□□□ -1.07
ATN1P54259 AC079804.1-201ENST00000461922 436 ntBASIC8.38□□□□□ -1.07
ATN1P54259 AC015724.1-201ENST00000478577 156 ntBASIC8.38□□□□□ -1.07
ATN1P54259 RN7SL655P-201ENST00000486087 298 ntBASIC8.38□□□□□ -1.07
ATN1P54259 IGLVIV-59-201ENST00000520218 250 ntBASIC8.38□□□□□ -1.07
ATN1P54259 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC8.38□□□□□ -1.07
ATN1P54259 AC020910.3-201ENST00000603701 874 ntBASIC8.38□□□□□ -1.07
ATN1P54259 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 AL451054.1-201ENST00000621770 772 ntBASIC8.38□□□□□ -1.07
ATN1P54259 U6.106-201ENST00000636360 105 ntBASIC8.38□□□□□ -1.07
ATN1P54259 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 AL590065.1-201ENST00000603371 4774 ntBASIC8.38□□□□□ -1.07
ATN1P54259 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 SAMMSON-226ENST00000642089 1582 ntBASIC8.38□□□□□ -1.07
ATN1P54259 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
ATN1P54259 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.38□□□□□ -1.07
ATN1P54259 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
ATN1P54259 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
ATN1P54259 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ATN1P54259 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ATN1P54259 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
ATN1P54259 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.37□□□□□ -1.07
ATN1P54259 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.37□□□□□ -1.07
ATN1P54259 AL449283.1-201ENST00000602631 3403 ntBASIC8.37□□□□□ -1.07
ATN1P54259 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
ATN1P54259 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
ATN1P54259 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.37□□□□□ -1.07
ATN1P54259 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms