Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC4.43□□□□□ -1.7
BRCA2P51587 AC130352.1-201ENST00000602979 661 ntBASIC4.43□□□□□ -1.7
BRCA2P51587 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.43□□□□□ -1.7
BRCA2P51587 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
BRCA2P51587 CDY11P-201ENST00000447168 1651 ntBASIC4.43□□□□□ -1.7
BRCA2P51587 AP004289.2-201ENST00000444413 1457 ntBASIC4.43□□□□□ -1.7
BRCA2P51587 AP001284.1-201ENST00000528393 2118 ntBASIC4.43□□□□□ -1.7
BRCA2P51587 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC4.43□□□□□ -1.7
BRCA2P51587 USP9YP36-201ENST00000424581 829 ntBASIC4.43□□□□□ -1.7
BRCA2P51587 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.43□□□□□ -1.7
BRCA2P51587 USP9YP31-201ENST00000431405 881 ntBASIC4.43□□□□□ -1.7
BRCA2P51587 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.43□□□□□ -1.7
BRCA2P51587 RPL36AP13-201ENST00000457490 317 ntBASIC4.43□□□□□ -1.7
BRCA2P51587 RPL7P1-201ENST00000468161 747 ntBASIC4.43□□□□□ -1.7
BRCA2P51587 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.43□□□□□ -1.7
BRCA2P51587 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.43□□□□□ -1.7
BRCA2P51587 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BRCA2P51587 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.43□□□□□ -1.7
BRCA2P51587 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRCA2P51587 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
BRCA2P51587 MTCO1P46-201ENST00000451639 1491 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
BRCA2P51587 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRCA2P51587 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
BRCA2P51587 NPM1P18-201ENST00000434232 732 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 AC083863.1-201ENST00000438811 231 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.42□□□□□ -1.7
BRCA2P51587 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRCA2P51587 AC022417.1-201ENST00000624768 1303 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 Z74696.2-201ENST00000436514 498 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 RN7SL807P-201ENST00000470923 297 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRCA2P51587 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.42□□□□□ -1.7
BRCA2P51587 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.42□□□□□ -1.7
BRCA2P51587 CYCSP40-201ENST00000575927 294 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.42□□□□□ -1.7
BRCA2P51587 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
BRCA2P51587 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
BRCA2P51587 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRCA2P51587 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRCA2P51587 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRCA2P51587 LINC01109-201ENST00000603837 3081 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRCA2P51587 SOD2P1-201ENST00000396543 562 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 FCF1P7-201ENST00000451185 558 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 AL133162.1-201ENST00000463228 453 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 AC005726.1-201ENST00000494679 427 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.42□□□□□ -1.7
BRCA2P51587 AC091516.1-201ENST00000549191 703 ntBASIC4.42□□□□□ -1.7
BRCA2P51587 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.42□□□□□ -1.7
BRCA2P51587 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
BRCA2P51587 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRCA2P51587 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.41□□□□□ -1.7
BRCA2P51587 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.41□□□□□ -1.7
BRCA2P51587 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRCA2P51587 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCA2P51587 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
BRCA2P51587 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.41□□□□□ -1.7
BRCA2P51587 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.41□□□□□ -1.7
BRCA2P51587 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
BRCA2P51587 AC091167.4-201ENST00000605079 184 ntBASIC4.41□□□□□ -1.7
BRCA2P51587 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCA2P51587 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
BRCA2P51587 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRCA2P51587 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCA2P51587 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRCA2P51587 SNORA3.3-201ENST00000408712 125 ntBASIC4.41□□□□□ -1.7
BRCA2P51587 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.41□□□□□ -1.7
BRCA2P51587 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.41□□□□□ -1.7
BRCA2P51587 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.41□□□□□ -1.7
BRCA2P51587 AC022655.2-201ENST00000577280 318 ntBASIC4.41□□□□□ -1.7
BRCA2P51587 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.41□□□□□ -1.7
BRCA2P51587 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.41□□□□□ -1.7
BRCA2P51587 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCA2P51587 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
BRCA2P51587 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.4□□□□□ -1.7
BRCA2P51587 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BRCA2P51587 VPS35P1-201ENST00000563400 1518 ntBASIC4.4□□□□□ -1.7
BRCA2P51587 RNA5SP126-201ENST00000365092 109 ntBASIC4.4□□□□□ -1.7
BRCA2P51587 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.4□□□□□ -1.7
BRCA2P51587 MIR8057-201ENST00000620957 69 ntBASIC4.4□□□□□ -1.7
BRCA2P51587 AC007159.1-201ENST00000566529 4706 ntBASIC4.4□□□□□ -1.7
BRCA2P51587 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BRCA2P51587 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
BRCA2P51587 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BRCA2P51587 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BRCA2P51587 RNA5SP446-201ENST00000515955 82 ntBASIC4.4□□□□□ -1.71
BRCA2P51587 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.4□□□□□ -1.71
BRCA2P51587 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC4.4□□□□□ -1.71
BRCA2P51587 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRCA2P51587 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRCA2P51587 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRCA2P51587 ZNF812P-201ENST00000457674 1694 ntBASIC4.4□□□□□ -1.71
BRCA2P51587 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRCA2P51587 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.4□□□□□ -1.71
BRCA2P51587 OR56B2P-201ENST00000317102 954 ntBASIC4.4□□□□□ -1.71
BRCA2P51587 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRCA2P51587 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.4□□□□□ -1.71
BRCA2P51587 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms