Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 AC093014.1-201ENST00000548926 724 ntBASIC7.38□□□□□ -1.23
SMARCA4P51532 AC011471.1-201ENST00000585766 187 ntBASIC7.38□□□□□ -1.23
SMARCA4P51532 AC008966.2-201ENST00000606157 453 ntBASIC7.38□□□□□ -1.23
SMARCA4P51532 AC008833.1-201ENST00000611633 691 ntBASIC7.38□□□□□ -1.23
SMARCA4P51532 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC7.38□□□□□ -1.23
SMARCA4P51532 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.38□□□□□ -1.23
SMARCA4P51532 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 RPL21P17-201ENST00000397467 475 ntBASIC7.38□□□□□ -1.23
SMARCA4P51532 GTF3AP5-201ENST00000442645 697 ntBASIC7.38□□□□□ -1.23
SMARCA4P51532 FCF1P7-201ENST00000451185 558 ntBASIC7.38□□□□□ -1.23
SMARCA4P51532 AC007967.1-201ENST00000455422 1159 ntBASIC7.38□□□□□ -1.23
SMARCA4P51532 AC108751.2-201ENST00000469993 231 ntBASIC7.38□□□□□ -1.23
SMARCA4P51532 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC7.38□□□□□ -1.23
SMARCA4P51532 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SMARCA4P51532 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SMARCA4P51532 Z82217.1-201ENST00000625157 8149 ntBASIC7.37□□□□□ -1.23
SMARCA4P51532 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SMARCA4P51532 AC021242.1-201ENST00000507315 2035 ntBASIC7.37□□□□□ -1.23
SMARCA4P51532 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.37□□□□□ -1.23
SMARCA4P51532 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.37□□□□□ -1.23
SMARCA4P51532 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SMARCA4P51532 SNORD66.1-201ENST00000391230 76 ntBASIC7.37□□□□□ -1.23
SMARCA4P51532 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC7.37□□□□□ -1.23
SMARCA4P51532 DNAJA1P1-201ENST00000425106 1187 ntBASIC7.37□□□□□ -1.23
SMARCA4P51532 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.37□□□□□ -1.23
SMARCA4P51532 RNU1-95P-201ENST00000516357 160 ntBASIC7.37□□□□□ -1.23
SMARCA4P51532 RNU1-128P-201ENST00000516704 160 ntBASIC7.37□□□□□ -1.23
SMARCA4P51532 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC7.37□□□□□ -1.23
SMARCA4P51532 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC7.37□□□□□ -1.23
SMARCA4P51532 AC005412.1-201ENST00000580812 1049 ntBASIC7.37□□□□□ -1.23
SMARCA4P51532 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SMARCA4P51532 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.36□□□□□ -1.23
SMARCA4P51532 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SMARCA4P51532 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SMARCA4P51532 AP001002.1-201ENST00000625148 1513 ntBASIC7.36□□□□□ -1.23
SMARCA4P51532 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SMARCA4P51532 UBTFL3-201ENST00000418934 1024 ntBASIC7.36□□□□□ -1.23
SMARCA4P51532 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.36□□□□□ -1.23
SMARCA4P51532 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.36□□□□□ -1.23
SMARCA4P51532 UBTFL6-201ENST00000477929 1024 ntBASIC7.36□□□□□ -1.23
SMARCA4P51532 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.36□□□□□ -1.23
SMARCA4P51532 PTS-202ENST00000524931 696 ntTSL 3 BASIC7.36□□□□□ -1.23
SMARCA4P51532 AC090286.3-201ENST00000573133 187 ntBASIC7.36□□□□□ -1.23
SMARCA4P51532 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SMARCA4P51532 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SMARCA4P51532 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SMARCA4P51532 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC7.35□□□□□ -1.23
SMARCA4P51532 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
SMARCA4P51532 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
SMARCA4P51532 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC7.35□□□□□ -1.23
SMARCA4P51532 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC7.35□□□□□ -1.23
SMARCA4P51532 RN7SL323P-201ENST00000494712 295 ntBASIC7.35□□□□□ -1.23
SMARCA4P51532 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC7.35□□□□□ -1.23
SMARCA4P51532 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.35□□□□□ -1.23
SMARCA4P51532 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC7.35□□□□□ -1.23
SMARCA4P51532 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA4P51532 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.35□□□□□ -1.23
SMARCA4P51532 AC005261.2-201ENST00000593427 4258 ntBASIC7.35□□□□□ -1.23
SMARCA4P51532 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
SMARCA4P51532 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA4P51532 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA4P51532 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.35□□□□□ -1.23
SMARCA4P51532 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC7.35□□□□□ -1.23
SMARCA4P51532 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA4P51532 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMARCA4P51532 SNORA60-201ENST00000362396 134 ntBASIC7.34□□□□□ -1.23
SMARCA4P51532 U1.1-201ENST00000384101 164 ntBASIC7.34□□□□□ -1.23
SMARCA4P51532 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.34□□□□□ -1.23
SMARCA4P51532 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SMARCA4P51532 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC7.34□□□□□ -1.23
SMARCA4P51532 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.34□□□□□ -1.23
SMARCA4P51532 RPS26P28-201ENST00000470806 348 ntBASIC7.34□□□□□ -1.23
SMARCA4P51532 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.34□□□□□ -1.23
SMARCA4P51532 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.34□□□□□ -1.23
SMARCA4P51532 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.34□□□□□ -1.23
SMARCA4P51532 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.34□□□□□ -1.23
SMARCA4P51532 AL034408.1-202ENST00000636088 415 ntBASIC7.34□□□□□ -1.23
SMARCA4P51532 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC7.34□□□□□ -1.23
SMARCA4P51532 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC7.34□□□□□ -1.23
SMARCA4P51532 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
SMARCA4P51532 LINC00561-201ENST00000565815 2738 ntBASIC7.34□□□□□ -1.23
SMARCA4P51532 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SMARCA4P51532 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMARCA4P51532 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMARCA4P51532 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SMARCA4P51532 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SMARCA4P51532 CASC19-204ENST00000641001 2055 ntBASIC7.34□□□□□ -1.23
SMARCA4P51532 RNA5SP399-201ENST00000364003 117 ntBASIC7.34□□□□□ -1.24
SMARCA4P51532 NDUFB4P4-201ENST00000404822 243 ntBASIC7.34□□□□□ -1.24
SMARCA4P51532 ATP6V1G1P6-201ENST00000504007 334 ntBASIC7.34□□□□□ -1.24
SMARCA4P51532 AC119751.5-201ENST00000514077 770 ntBASIC7.34□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms