Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.5□□□□□ -1.37
GRIK1P39086 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 AC024587.1-201ENST00000505925 2157 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 AC007159.1-201ENST00000566529 4706 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.5□□□□□ -1.37
GRIK1P39086 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 RNU6-254P-201ENST00000363377 107 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 RN7SKP269-201ENST00000365545 319 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 AC004987.3-201ENST00000413879 771 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 AC093716.1-201ENST00000435923 377 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 AL022238.1-201ENST00000442557 355 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 AC108463.1-201ENST00000450258 347 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 WBP1LP4-201ENST00000505043 344 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 AC111000.3-201ENST00000508057 576 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 BTG4P1-201ENST00000510421 183 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 RNA5SP434-201ENST00000516647 121 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 AP005639.1-201ENST00000526939 192 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.5□□□□□ -1.37
GRIK1P39086 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 AP002453.2-201ENST00000533503 320 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.5□□□□□ -1.37
GRIK1P39086 HMGN2P47-201ENST00000559378 272 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 AC007151.1-201ENST00000572774 483 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 MIR3913-1-201ENST00000577744 102 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 MIR3668-201ENST00000582138 75 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 NPIPB1P-202ENST00000588786 828 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.5□□□□□ -1.37
GRIK1P39086 AC068768.2-201ENST00000602352 343 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.5□□□□□ -1.37
GRIK1P39086 COX6CP4-201ENST00000605798 228 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 AP003122.6-201ENST00000623831 495 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 AC140479.2-201ENST00000421567 3130 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
GRIK1P39086 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GRIK1P39086 AC022034.1-201ENST00000512867 2156 ntBASIC6.5□□□□□ -1.37
GRIK1P39086 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GRIK1P39086 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GRIK1P39086 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.49□□□□□ -1.37
GRIK1P39086 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.49□□□□□ -1.37
GRIK1P39086 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GRIK1P39086 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GRIK1P39086 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GRIK1P39086 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
GRIK1P39086 Y_RNA.58-201ENST00000362807 102 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 Y_RNA.89-201ENST00000363031 102 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 Y_RNA.154-201ENST00000363624 102 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 RNY3P1-201ENST00000365085 102 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 RNY3-201ENST00000365484 102 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 LCN1P2-201ENST00000372030 223 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 Y_RNA.490-201ENST00000384413 102 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 RNU6-297P-201ENST00000384636 107 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GRIK1P39086 TAF9BP1-201ENST00000396646 746 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 NCSTNP1-201ENST00000406229 144 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 RPS15AP38-201ENST00000413110 372 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.49□□□□□ -1.37
GRIK1P39086 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIK1P39086 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIK1P39086 MTCO2P12-201ENST00000427426 682 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 AL035458.1-201ENST00000433096 585 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.49□□□□□ -1.37
GRIK1P39086 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.49□□□□□ -1.37
GRIK1P39086 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.49□□□□□ -1.37
GRIK1P39086 VDAC2P4-201ENST00000452925 711 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 CALM1P2-201ENST00000452941 448 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 PNPLA4P1-201ENST00000458328 305 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 AC073594.1-201ENST00000462065 364 ntBASIC6.49□□□□□ -1.37
GRIK1P39086 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.49□□□□□ -1.37
GRIK1P39086 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms