Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CHRNA3P32297 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CHRNA3P32297 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.83□□□□□ -1.64
CHRNA3P32297 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA3P32297 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA3P32297 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA3P32297 AL590240.1-201ENST00000334118 313 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CHRNA3P32297 RNU1-82P-201ENST00000390851 165 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.83□□□□□ -1.64
CHRNA3P32297 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 AC245028.1-201ENST00000423259 256 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 ARL4AP4-201ENST00000434170 518 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 AC092013.1-201ENST00000438795 332 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 AC011753.3-201ENST00000443436 406 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.83□□□□□ -1.64
CHRNA3P32297 PTMAP3-201ENST00000447474 330 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 AC079168.2-201ENST00000453977 416 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 RPL23AP72-201ENST00000492447 435 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.83□□□□□ -1.64
CHRNA3P32297 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA3P32297 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.83□□□□□ -1.64
CHRNA3P32297 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.83□□□□□ -1.64
CHRNA3P32297 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.83□□□□□ -1.64
CHRNA3P32297 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA3P32297 AC134698.5-201ENST00000519444 336 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 AC100770.1-201ENST00000532310 322 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.83□□□□□ -1.64
CHRNA3P32297 AC008759.1-201ENST00000589783 983 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.83□□□□□ -1.64
CHRNA3P32297 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 AC234771.5-201ENST00000600161 514 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 OR7A19P-201ENST00000608051 733 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 AL353726.1-201ENST00000614041 1000 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 MIR7703-201ENST00000620784 77 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA3P32297 AL451142.2-201ENST00000429076 2090 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHRNA3P32297 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 AL442639.1-201ENST00000625030 1899 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 AC090971.4-201ENST00000560291 1800 ntBASIC4.83□□□□□ -1.64
CHRNA3P32297 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.83□□□□□ -1.64
CHRNA3P32297 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CHRNA3P32297 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CHRNA3P32297 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA3P32297 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA3P32297 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA3P32297 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA3P32297 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA3P32297 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA3P32297 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA3P32297 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA3P32297 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA3P32297 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CHRNA3P32297 RNA5SP505-201ENST00000364748 108 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 RNU6-304P-201ENST00000364855 107 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 RNU6-31P-201ENST00000384388 108 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 RPS4XP9-201ENST00000405151 780 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 RN7SKP247-201ENST00000411094 308 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 OR13Z1P-201ENST00000416141 834 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 AC119751.6-201ENST00000416712 186 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA3P32297 H2AFZP6-201ENST00000444403 394 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA3P32297 EIF4A1P11-201ENST00000451239 222 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CHRNA3P32297 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA3P32297 AC010627.1-201ENST00000503819 1294 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 CDH12P2-201ENST00000504393 298 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA3P32297 AC108120.2-201ENST00000512973 294 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 RNU2-30P-201ENST00000516209 141 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA3P32297 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA3P32297 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA3P32297 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA3P32297 OR5AN2P-201ENST00000534535 896 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA3P32297 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA3P32297 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA3P32297 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA3P32297 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA3P32297 AC068790.7-201ENST00000602347 528 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 AC073111.2-201ENST00000605657 1075 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA3P32297 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CHRNA3P32297 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA3P32297 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA3P32297 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA3P32297 AC009229.4-201ENST00000623854 1947 ntBASIC4.82□□□□□ -1.64
CHRNA3P32297 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms