| TFE3 | P19532 | AC004690.2-201 | ENST00000472838 | 1754 nt | TSL 1 (best) BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | COA1-201 | ENST00000223336 | 927 nt | APPRIS P3 TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | HNMT-201 | ENST00000280096 | 504 nt | TSL 1 (best) BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | C1orf100-201 | ENST00000308105 | 579 nt | APPRIS P1 TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | TSLP-201 | ENST00000344895 | 736 nt | APPRIS P2 TSL 1 (best) BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL158212.2-201 | ENST00000369391 | 460 nt | TSL 3 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | Y_RNA.390-201 | ENST00000383932 | 102 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MIR137-201 | ENST00000385223 | 102 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | SNORD115-47-201 | ENST00000391226 | 86 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | KRTAP3-1-201 | ENST00000391588 | 594 nt | APPRIS P1 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RPA3-204 | ENST00000406109 | 434 nt | TSL 3 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | Y_RNA.598-201 | ENST00000410480 | 95 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RNU6-248P-201 | ENST00000410720 | 107 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RPS6P23-201 | ENST00000413224 | 722 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | NPM1P4-201 | ENST00000414095 | 812 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ICA1L-210 | ENST00000425178 | 879 nt | TSL 1 (best) BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | FGF12-202 | ENST00000430714 | 603 nt | TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL080316.1-201 | ENST00000432438 | 499 nt | TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ST7-AS2-203 | ENST00000434993 | 918 nt | TSL 1 (best) BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC104653.2-201 | ENST00000435407 | 416 nt | TSL 3 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL139230.1-201 | ENST00000440094 | 425 nt | TSL 3 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MTCO3P18-201 | ENST00000440206 | 761 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | H3F3BP1-201 | ENST00000440551 | 403 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | HCG14-201 | ENST00000444986 | 413 nt | TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | PSPHP1-201 | ENST00000450062 | 261 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | TNS3-209 | ENST00000458317 | 1156 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL672167.3-201 | ENST00000465951 | 960 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL035690.1-201 | ENST00000490892 | 383 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC108941.1-201 | ENST00000502853 | 530 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MSMO1-203 | ENST00000504317 | 1026 nt | TSL 1 (best) BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC093722.1-201 | ENST00000504882 | 489 nt | TSL 3 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC021678.1-201 | ENST00000505195 | 936 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | IL7R-204 | ENST00000506850 | 1004 nt | TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC091133.4-201 | ENST00000511142 | 308 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MTND5P4-201 | ENST00000514978 | 288 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC011853.1-201 | ENST00000518911 | 454 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AP002748.2-201 | ENST00000528671 | 348 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AP003031.2-202 | ENST00000533590 | 572 nt | TSL 4 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC022075.3-201 | ENST00000539009 | 649 nt | TSL 3 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AP000462.2-203 | ENST00000540545 | 715 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | A2MP1-201 | ENST00000543404 | 1201 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MIR4307HG-201 | ENST00000548170 | 822 nt | TSL 3 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | COPZ1-205 | ENST00000548753 | 778 nt | TSL 3 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | COPZ1-218 | ENST00000553231 | 551 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL157871.6-201 | ENST00000553954 | 206 nt | TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | LINC00520-201 | ENST00000554186 | 831 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | CYCSP2-201 | ENST00000558168 | 301 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | INO80-AS1-201 | ENST00000558967 | 312 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | EIF5A2P1-201 | ENST00000564027 | 460 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC002519.2-203 | ENST00000567043 | 837 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | LINC00556-201 | ENST00000569603 | 412 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC015845.1-201 | ENST00000579285 | 335 nt | TSL 3 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC024267.4-202 | ENST00000582631 | 436 nt | TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | TRIM37-212 | ENST00000584889 | 353 nt | TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL354740.1-205 | ENST00000586413 | 1230 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC011477.2-201 | ENST00000590697 | 921 nt | TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | LINC01999-201 | ENST00000592917 | 646 nt | TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | BNIP3P8-201 | ENST00000597863 | 560 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL589935.1-201 | ENST00000602418 | 488 nt | TSL 4 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC091488.1-201 | ENST00000604239 | 660 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC092681.3-201 | ENST00000609463 | 678 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC103710.1-201 | ENST00000610003 | 901 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC008115.3-201 | ENST00000614874 | 549 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | FAM27E2-201 | ENST00000619668 | 403 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC009120.7-201 | ENST00000623452 | 780 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL157786.1-207 | ENST00000627771 | 695 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | CRYM-AS1-204 | ENST00000637983 | 556 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC092329.4-204 | ENST00000639327 | 549 nt | TSL 4 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AC068769.1-201 | ENST00000474767 | 2426 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | SMAD5-211 | ENST00000545279 | 7012 nt | APPRIS P1 TSL 1 (best) BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ECT2L-205 | ENST00000541398 | 4483 nt | APPRIS P1 TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | IFI16-203 | ENST00000359709 | 2609 nt | APPRIS ALT2 TSL 2 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | PCDH15-202 | ENST00000361849 | 7017 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | PCDH15-205 | ENST00000373957 | 7032 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | CPS1-204 | ENST00000451903 | 4770 nt | TSL 1 (best) BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | TBC1D5-201 | ENST00000253692 | 7854 nt | APPRIS P1 TSL 1 (best) BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | PLEKHA1-201 | ENST00000368988 | 3872 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | GCSAML-210 | ENST00000536561 | 4063 nt | APPRIS P3 TSL 4 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | GRIK1-201 | ENST00000327783 | 3179 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MAPK6PS2-201 | ENST00000379571 | 2060 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL031320.2-201 | ENST00000591892 | 2079 nt | TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | EMSY-201 | ENST00000334736 | 5508 nt | APPRIS P3 TSL 5 BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL731532.1-201 | ENST00000623972 | 4236 nt | BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | IKZF3-210 | ENST00000377958 | 1837 nt | TSL 1 (best) BASIC | 6.32 | □□□□□ -1.4 | | |
| TFE3 | P19532 | TRAT1-202 | ENST00000426646 | 1596 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ARID4A-203 | ENST00000395168 | 4051 nt | TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AHNAK2-201 | ENST00000333244 | 18254 nt | APPRIS P1 TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | CDK14-206 | ENST00000436577 | 4787 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | MRE11P1-201 | ENST00000464884 | 2127 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | NABP1-204 | ENST00000410026 | 11521 nt | TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | CYLD-207 | ENST00000564326 | 3259 nt | APPRIS P1 TSL 5 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | RRM1-201 | ENST00000300738 | 3076 nt | APPRIS P1 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ZNF415-203 | ENST00000500065 | 2496 nt | APPRIS ALT2 TSL 4 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | AL080276.2-201 | ENST00000637995 | 2090 nt | TSL 3 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | FUNDC2P3-201 | ENST00000334716 | 533 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | ZNF28-201 | ENST00000339844 | 650 nt | TSL 4 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | OR51A7-201 | ENST00000359350 | 1048 nt | APPRIS P1 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | Y_RNA.303-201 | ENST00000364998 | 94 nt | BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | CRP-204 | ENST00000368112 | 787 nt | TSL 2 BASIC | 6.31 | □□□□□ -1.4 | | |
| TFE3 | P19532 | C1orf189-201 | ENST00000368525 | 387 nt | APPRIS P1 TSL 1 (best) BASIC | 6.31 | □□□□□ -1.4 | | |