Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CEACAMP7-201ENST00000444105 496 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.38□□□□□ -1.87
SSSCA1O60232 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.38□□□□□ -1.87
SSSCA1O60232 AC053481.1-201ENST00000467217 306 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 AC096741.1-201ENST00000472250 846 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.38□□□□□ -1.87
SSSCA1O60232 AC010374.1-201ENST00000503762 1237 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 AL592156.1-201ENST00000508758 304 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.38□□□□□ -1.87
SSSCA1O60232 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 IGLVIV-53-201ENST00000520107 367 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.38□□□□□ -1.87
SSSCA1O60232 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 AC007599.1-201ENST00000568688 1174 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 RN7SL371P-201ENST00000578099 267 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 MIR4489-201ENST00000578869 62 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 AC091042.1-201ENST00000579213 173 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 ELOCP28-201ENST00000590044 317 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.38□□□□□ -1.87
SSSCA1O60232 AC104662.1-201ENST00000604448 511 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 AC015908.5-201ENST00000623289 343 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 AC008013.2-202ENST00000637965 364 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.38□□□□□ -1.87
SSSCA1O60232 C4BPAP1-201ENST00000415474 1893 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSSCA1O60232 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSSCA1O60232 NOL8P1-201ENST00000508336 3529 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AL356489.2-201ENST00000566968 3528 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AC063923.1-201ENST00000478982 1619 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSSCA1O60232 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SSSCA1O60232 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSSCA1O60232 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSSCA1O60232 MIR365B-201ENST00000362317 111 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 RNA5SP507-201ENST00000363603 121 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SSSCA1O60232 RAB5CP1-201ENST00000395972 580 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AL583835.1-201ENST00000399570 407 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 MIR298-201ENST00000401212 88 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 FAR2P2-201ENST00000413041 594 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.37□□□□□ -1.87
SSSCA1O60232 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSSCA1O60232 RPL6P21-201ENST00000418672 846 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AL139095.3-201ENST00000419672 1203 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 RPL7AP25-201ENST00000423357 805 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 MTCO1P54-201ENST00000430139 712 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.37□□□□□ -1.87
SSSCA1O60232 NFYAP1-201ENST00000431953 972 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC3.37□□□□□ -1.87
SSSCA1O60232 AC144530.1-201ENST00000452862 555 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AC091685.2-201ENST00000454924 864 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.37□□□□□ -1.87
SSSCA1O60232 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.37□□□□□ -1.87
SSSCA1O60232 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.37□□□□□ -1.87
SSSCA1O60232 RN7SL101P-201ENST00000496350 279 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
SSSCA1O60232 AC146944.2-203ENST00000502493 354 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.37□□□□□ -1.87
SSSCA1O60232 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSSCA1O60232 AC139495.1-202ENST00000513164 354 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 IGLVIV-64-201ENST00000518581 301 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 VTA1P2-201ENST00000520205 911 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSSCA1O60232 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.37□□□□□ -1.87
SSSCA1O60232 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.37□□□□□ -1.87
SSSCA1O60232 AC021483.2-201ENST00000567415 758 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.37□□□□□ -1.87
SSSCA1O60232 RN7SL722P-201ENST00000617780 284 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 RN7SL565P-201ENST00000618246 284 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 AP005264.7-201ENST00000625003 745 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.37□□□□□ -1.87
SSSCA1O60232 VPS35P1-201ENST00000563400 1518 ntBASIC3.37□□□□□ -1.87
SSSCA1O60232 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
SSSCA1O60232 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSSCA1O60232 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSSCA1O60232 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
SSSCA1O60232 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SSSCA1O60232 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SSSCA1O60232 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSSCA1O60232 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.37□□□□□ -1.87
SSSCA1O60232 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.36□□□□□ -1.87
SSSCA1O60232 AC132825.1-201ENST00000463573 2247 ntBASIC3.36□□□□□ -1.87
SSSCA1O60232 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.36□□□□□ -1.87
SSSCA1O60232 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSSCA1O60232 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SSSCA1O60232 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms