Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCDC188H7C350 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC188H7C350 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC188H7C350 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC188H7C350 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC188H7C350 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC188H7C350 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.84□□□□□ -1.64
CCDC188H7C350 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC188H7C350 AC093311.1-201ENST00000506586 2021 ntBASIC4.84□□□□□ -1.64
CCDC188H7C350 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC188H7C350 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC188H7C350 AC090017.1-201ENST00000548612 1779 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC188H7C350 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC188H7C350 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC188H7C350 GTF2H2B-203ENST00000508065 1432 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC188H7C350 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
CCDC188H7C350 IGKV7-3-201ENST00000357453 298 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 RN7SKP162-201ENST00000363605 345 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 RN7SKP160-201ENST00000363804 340 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 RNA5SP151-201ENST00000365632 117 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 RNU1-82P-201ENST00000390851 165 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 VDAC2P1-201ENST00000399358 958 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 MIR1286-201ENST00000408112 78 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 OR2X1P-201ENST00000421144 687 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC188H7C350 SKP1P3-201ENST00000429280 487 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 ELOCP10-201ENST00000440624 327 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 RPS27P5-201ENST00000444247 244 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC188H7C350 AC090114.3-201ENST00000479267 829 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 RPS4XP14-201ENST00000493072 781 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 AC005912.1-201ENST00000495392 255 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC188H7C350 AC091868.1-201ENST00000508746 304 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC188H7C350 IGKV2-18-201ENST00000522607 343 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC188H7C350 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC188H7C350 AP003049.1-201ENST00000529418 457 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 OR10G5P-201ENST00000532733 358 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC188H7C350 AC025260.1-201ENST00000548858 430 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC188H7C350 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC188H7C350 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC188H7C350 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC188H7C350 ELOCP34-201ENST00000604436 327 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 OR7A19P-201ENST00000608051 733 ntBASIC4.83□□□□□ -1.64
CCDC188H7C350 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC188H7C350 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC188H7C350 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC188H7C350 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC188H7C350 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC188H7C350 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC188H7C350 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC188H7C350 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC188H7C350 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC188H7C350 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC188H7C350 AC135352.1-201ENST00000506173 1418 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCDC188H7C350 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC188H7C350 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC188H7C350 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCDC188H7C350 MIR16-2-201ENST00000362117 81 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC188H7C350 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC188H7C350 FCF1P5-201ENST00000406490 482 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 RN7SKP167-201ENST00000411047 285 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 GJA6P-201ENST00000415117 1042 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 GTF2IP2-201ENST00000424290 697 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 SEC63P1-201ENST00000425785 1258 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 RPS26P47-201ENST00000427219 348 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC188H7C350 RPL23AP25-201ENST00000430973 463 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AL353093.1-201ENST00000441292 436 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC188H7C350 AL589765.3-201ENST00000446084 462 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 RPS5P7-201ENST00000456664 608 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AC005229.2-201ENST00000456995 399 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AC110749.1-201ENST00000462007 357 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 CCDC75P1-201ENST00000469247 791 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AC072052.1-201ENST00000496556 306 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AC010627.1-201ENST00000503819 1294 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 PPBPP1-201ENST00000510807 373 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC188H7C350 AC027338.1-201ENST00000514840 825 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC188H7C350 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC188H7C350 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC188H7C350 OR11J2P-201ENST00000555298 907 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC188H7C350 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC188H7C350 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC188H7C350 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC188H7C350 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC188H7C350 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC188H7C350 AC005034.4-201ENST00000603612 899 ntBASIC4.82□□□□□ -1.64
CCDC188H7C350 AC079610.2-201ENST00000604818 690 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms