Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL606490.1-201ENST00000452266 765 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 CDC42P1-201ENST00000456658 548 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 NAP1L1P3-201ENST00000462291 880 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AL591473.1-201ENST00000464297 313 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 SNRPCP2-201ENST00000504370 475 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC138938.1-201ENST00000515431 782 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 PRELID3BP4-201ENST00000515476 571 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 HMGB1P1-201ENST00000522557 636 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC083923.1-201ENST00000523708 376 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 MTATP6P15-201ENST00000527233 835 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 DEFB130C-202ENST00000530001 230 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 MTND3P12-201ENST00000559068 328 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC009097.3-201ENST00000563557 1018 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 MIR4433B-201ENST00000581329 102 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 MIR548Y-201ENST00000582739 110 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 MIR4691-201ENST00000583764 85 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC245036.5-201ENST00000596330 847 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 IMMP1LP1-201ENST00000605170 488 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 BNIP3P41-202ENST00000616656 861 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC015804.1-201ENST00000622935 435 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AC024595.1-201ENST00000623088 387 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 AL121594.5-201ENST00000631724 573 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 MTND2P41-201ENST00000637599 773 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 CASC19-284ENST00000642142 1868 ntBASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.98□□□□□ -1.61
TCRBV7S3A2A0A539 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC008758.3-201ENST00000507003 1829 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 RNA5SP428-201ENST00000365129 132 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC119751.3-201ENST00000399720 670 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AL359643.1-201ENST00000404109 423 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 RNA5SP345-201ENST00000410646 108 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 RPS24P7-201ENST00000416921 246 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 RPS3AP37-201ENST00000419176 745 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC005005.2-201ENST00000420779 380 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 FTH1P16-201ENST00000435241 552 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AL590399.4-201ENST00000436561 601 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC002542.1-201ENST00000440683 193 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 MTCYBP42-201ENST00000444653 1130 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 HMGB3P6-201ENST00000444896 598 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 MTCYBP11-201ENST00000447254 1109 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 NPM1P19-201ENST00000450070 712 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AURKAPS1-201ENST00000451805 1212 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 RPS6P2-201ENST00000454208 705 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC096992.1-201ENST00000459808 709 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 RN7SL172P-201ENST00000460535 303 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 RPL7P48-201ENST00000461513 746 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 RPS18P6-201ENST00000476880 458 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC079841.1-201ENST00000481228 950 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC012146.2-201ENST00000576545 416 ntBASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.97□□□□□ -1.61
TCRBV7S3A2A0A539 AC011445.2-201ENST00000599274 173 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms