Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 FAM3C2-201ENST00000312214 681 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 RN7SKP124-201ENST00000364730 341 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 Y_RNA.311-201ENST00000365068 96 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 ATP5F1P3-201ENST00000397213 657 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 NPM1P4-201ENST00000414095 812 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 RPL6P29-201ENST00000414863 865 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC005345.1-201ENST00000431868 217 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL050321.1-201ENST00000432363 400 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC004865.1-201ENST00000442276 1003 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 RPL7P59-201ENST00000447700 943 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 SDC4P-201ENST00000453285 601 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 DNAJB5P1-201ENST00000454004 806 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC093166.4-201ENST00000457867 318 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 MTND1P16-201ENST00000465177 898 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 RPS23P6-201ENST00000466136 431 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC104689.1-201ENST00000473356 768 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 DUTP7-201ENST00000507982 486 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 HNRNPKP5-201ENST00000515300 253 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 BX510359.5-201ENST00000515651 304 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 SCARNA6.1-201ENST00000516989 238 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 HIGD1AP17-201ENST00000554576 276 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL354976.1-201ENST00000613843 387 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC108359.1-201ENST00000616451 1211 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC069209.1-201ENST00000619282 651 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC138965.3-201ENST00000623875 498 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL031595.2-201ENST00000624215 19071 ntBASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
PCDHGA3Q9Y5H0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 OR9K1P-201ENST00000326513 941 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 RNU6-621P-201ENST00000364752 109 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AL590084.2-201ENST00000401481 382 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 GAPDHP42-201ENST00000406848 981 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AL133264.1-201ENST00000407157 562 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 USP9YP26-201ENST00000421008 661 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC004074.1-201ENST00000421810 1063 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AL355433.1-201ENST00000422804 300 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 NPM1P24-201ENST00000428039 894 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 HMGB3P24-201ENST00000433260 622 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 RPL5P25-201ENST00000441148 775 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AC005297.1-201ENST00000444765 862 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 RPL21P71-201ENST00000465598 459 ntBASIC5.56□□□□□ -1.52
PCDHGA3Q9Y5H0 AL133445.1-201ENST00000467051 452 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms