Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RNU1-6P-201ENST00000516290 144 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 GSTP1P1-201ENST00000548078 319 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 RPL7P50-201ENST00000600588 727 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AC004948.1-201ENST00000609858 672 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AL035461.2-201ENST00000619201 524 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AC018445.2-201ENST00000622987 260 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 MAPK10-286ENST00000641208 8747 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 HSPD1P14-201ENST00000432666 1618 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 RNA5SP191-201ENST00000362585 102 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 SNORA74A-201ENST00000364089 198 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AL645927.1-201ENST00000396783 406 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AL589647.1-201ENST00000402485 466 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AL139039.2-201ENST00000407436 479 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 RPL26P37-201ENST00000411983 438 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 COX6B1P1-201ENST00000415962 213 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC007559.1-201ENST00000428736 355 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC073587.1-201ENST00000447093 876 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AL645939.1-201ENST00000453429 797 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 RPS5P7-201ENST00000456664 608 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 RPL7P16-201ENST00000479738 738 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 CDH12P2-201ENST00000504393 298 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 ATG10-AS1-201ENST00000504846 648 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 HMGB3P13-201ENST00000511263 607 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 CYCSP28-201ENST00000534284 321 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC105129.1-201ENST00000560250 297 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 RN7SL52P-201ENST00000584271 284 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC020915.5-201ENST00000596836 964 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC115621.1-201ENST00000604653 858 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC026979.4-201ENST00000606555 645 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC068870.2-201ENST00000620635 389 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC007342.8-201ENST00000623278 678 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC011815.3-201ENST00000624194 473 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AL442639.1-201ENST00000625030 1899 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 USP9YP4-201ENST00000424401 1745 ntBASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDD3Q9Y3P4 ZFRP1-201ENST00000457579 2970 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC007529.1-201ENST00000418574 2178 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 RNU6-891P-201ENST00000384280 111 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 RN7SKP278-201ENST00000410504 342 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 RNA5SP146-201ENST00000410743 123 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 RPL30P3-201ENST00000424262 333 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 RPL21P43-201ENST00000425440 472 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 AC007563.3-201ENST00000433233 371 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 PTMAP6-201ENST00000439110 327 ntBASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.05□□□□□ -1.76
RHBDD3Q9Y3P4 OR1H1P-201ENST00000448731 937 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms