Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AC104297.1-201ENST00000393779 870 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 GAPDHP49-201ENST00000421421 961 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 NMNAT1P2-201ENST00000435192 860 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AL935212.3-201ENST00000450729 284 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 ISCUP1-201ENST00000454451 448 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 CCDC75P1-201ENST00000469247 791 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AC022795.1-201ENST00000473808 480 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AC106806.2-201ENST00000509365 500 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 MIR6716-201ENST00000613413 80 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AC011944.2-201ENST00000624440 683 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 CCT8P1-201ENST00000413611 1657 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 SALL4P2-201ENST00000423288 2910 ntBASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 AL731566.1-201ENST00000620490 1937 ntBASIC4.46□□□□□ -1.69
APOBEC3BQ9UH17 AL356489.2-201ENST00000566968 3528 ntBASIC4.46□□□□□ -1.69
APOBEC3BQ9UH17 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AL080315.1-201ENST00000406055 466 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 SEPT7P8-201ENST00000413308 775 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 Z85994.2-201ENST00000434327 452 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 MRPL48P1-201ENST00000445390 636 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AC099063.2-201ENST00000446360 662 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AC243772.1-201ENST00000451620 410 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AL672167.3-201ENST00000465951 960 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AC010618.1-201ENST00000469924 477 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 RN7SL810P-201ENST00000493031 276 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 PGBD4P4-201ENST00000509673 613 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 RNA5SP464-201ENST00000516251 108 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 snoU109.6-201ENST00000516831 118 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AP000827.1-201ENST00000527814 258 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AC020910.2-201ENST00000603635 610 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 BX322635.1-201ENST00000605804 496 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 AC100814.1-201ENST00000606963 623 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 MFSD8-220ENST00000641243 1422 ntBASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
APOBEC3BQ9UH17 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 CUL4AP1-201ENST00000514750 1863 ntBASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 AC090971.4-201ENST00000560291 1800 ntBASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 RNU1-83P-201ENST00000363426 164 ntBASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 RN7SKP227-201ENST00000364445 330 ntBASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 OR6C69P-201ENST00000394268 893 ntBASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 RPL23AP59-201ENST00000399415 461 ntBASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 MTND3P20-201ENST00000407663 186 ntBASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 TMSB10P2-201ENST00000416049 131 ntBASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 RPL36AP10-201ENST00000421785 322 ntBASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 IPMKP1-201ENST00000425988 855 ntBASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.45□□□□□ -1.7
APOBEC3BQ9UH17 AP001324.1-201ENST00000428553 399 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms