Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL589872.1-201ENST00000426602 288 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 NPM1P34-201ENST00000428821 893 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC239367.3-201ENST00000428996 814 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 Z68868.1-201ENST00000429048 544 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC015983.1-201ENST00000441577 373 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RPL23AP16-201ENST00000441715 421 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RPS26P30-201ENST00000443431 335 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC099563.1-201ENST00000456086 418 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 HAUS8P1-201ENST00000549005 542 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC069542.2-201ENST00000624816 216 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC073488.2-201ENST00000631903 751 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AC116667.2-201ENST00000641075 823 ntBASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL25A1Q9BXS0 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AC012618.3-205ENST00000637896 1496 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 PPIAP22-201ENST00000358455 498 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 Y_RNA.552-201ENST00000384665 112 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 MIR217-201ENST00000384817 110 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 RNU6-1158P-201ENST00000391167 107 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 RPS26P13-201ENST00000419030 330 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AL451054.2-201ENST00000420896 202 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 Z93242.1-201ENST00000427102 353 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 RPS27AP6-201ENST00000427962 448 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 PCBP2P1-201ENST00000437262 977 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 CBX1P1-201ENST00000440184 427 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 CEACAMP9-201ENST00000442990 513 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AC013399.1-201ENST00000450311 418 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 GAPDHP56-201ENST00000506031 988 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AC053481.3-201ENST00000577881 843 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 CKS1BP3-201ENST00000600888 237 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 MTCO2P22-201ENST00000603246 681 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 FO393422.1-201ENST00000603908 708 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 IMMP1LP3-201ENST00000604197 224 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AL592436.1-201ENST00000605135 558 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 PRR13P7-201ENST00000605538 430 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 MIR98-201ENST00000606724 119 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AL161734.1-201ENST00000609720 557 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AC016251.1-201ENST00000624299 4198 ntBASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COL25A1Q9BXS0 AC089998.1-201ENST00000548575 3141 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms