Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.56□□□□□ -1.52
ABCA3Q99758 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ABCA3Q99758 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.56□□□□□ -1.52
ABCA3Q99758 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ABCA3Q99758 MIR218-2-201ENST00000385006 110 ntBASIC5.56□□□□□ -1.52
ABCA3Q99758 SNORA57.3-201ENST00000411095 141 ntBASIC5.56□□□□□ -1.52
ABCA3Q99758 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.56□□□□□ -1.52
ABCA3Q99758 AC018635.1-201ENST00000468292 1030 ntBASIC5.56□□□□□ -1.52
ABCA3Q99758 KRT19P6-201ENST00000510983 209 ntBASIC5.56□□□□□ -1.52
ABCA3Q99758 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.56□□□□□ -1.52
ABCA3Q99758 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.56□□□□□ -1.52
ABCA3Q99758 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.56□□□□□ -1.52
ABCA3Q99758 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.56□□□□□ -1.52
ABCA3Q99758 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ABCA3Q99758 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ABCA3Q99758 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ABCA3Q99758 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ABCA3Q99758 NCOA4P2-201ENST00000340589 1813 ntBASIC5.55□□□□□ -1.52
ABCA3Q99758 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.55□□□□□ -1.52
ABCA3Q99758 MIR634-201ENST00000385208 97 ntBASIC5.55□□□□□ -1.52
ABCA3Q99758 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.55□□□□□ -1.52
ABCA3Q99758 AC009506.2-201ENST00000420635 840 ntBASIC5.55□□□□□ -1.52
ABCA3Q99758 RPL7P4-203ENST00000430239 730 ntBASIC5.55□□□□□ -1.52
ABCA3Q99758 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.55□□□□□ -1.52
ABCA3Q99758 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.55□□□□□ -1.52
ABCA3Q99758 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.55□□□□□ -1.52
ABCA3Q99758 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.55□□□□□ -1.52
ABCA3Q99758 AC027807.1-201ENST00000559921 996 ntBASIC5.55□□□□□ -1.52
ABCA3Q99758 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.55□□□□□ -1.52
ABCA3Q99758 MIR4660-201ENST00000583549 74 ntBASIC5.55□□□□□ -1.52
ABCA3Q99758 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.55□□□□□ -1.52
ABCA3Q99758 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.55□□□□□ -1.52
ABCA3Q99758 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.55□□□□□ -1.52
ABCA3Q99758 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ABCA3Q99758 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.55□□□□□ -1.52
ABCA3Q99758 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ABCA3Q99758 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
ABCA3Q99758 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ABCA3Q99758 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ABCA3Q99758 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.54□□□□□ -1.52
ABCA3Q99758 MIR1179-201ENST00000408703 91 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.54□□□□□ -1.52
ABCA3Q99758 AC245052.5-201ENST00000416320 649 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 AL358472.1-201ENST00000431295 329 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 AL139099.1-201ENST00000497398 403 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.54□□□□□ -1.52
ABCA3Q99758 AC107016.1-201ENST00000550463 337 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.54□□□□□ -1.52
ABCA3Q99758 AL159169.3-201ENST00000608871 561 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.54□□□□□ -1.52
ABCA3Q99758 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ABCA3Q99758 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
ABCA3Q99758 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
ABCA3Q99758 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ABCA3Q99758 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ABCA3Q99758 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ABCA3Q99758 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ABCA3Q99758 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ABCA3Q99758 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
ABCA3Q99758 RPL21P17-201ENST00000397467 475 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 MIR1911-201ENST00000410783 80 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.54□□□□□ -1.52
ABCA3Q99758 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.54□□□□□ -1.52
ABCA3Q99758 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.54□□□□□ -1.52
ABCA3Q99758 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.54□□□□□ -1.52
ABCA3Q99758 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.54□□□□□ -1.52
ABCA3Q99758 SCARNA14-201ENST00000516903 136 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 AC006064.5-201ENST00000541782 248 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 AC005412.1-201ENST00000580812 1049 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 AL606490.9-201ENST00000603331 271 ntBASIC5.54□□□□□ -1.52
ABCA3Q99758 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.54□□□□□ -1.52
ABCA3Q99758 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ABCA3Q99758 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.54□□□□□ -1.52
ABCA3Q99758 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCA3Q99758 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCA3Q99758 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCA3Q99758 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.53□□□□□ -1.52
ABCA3Q99758 VPS35P1-201ENST00000563400 1518 ntBASIC5.53□□□□□ -1.52
ABCA3Q99758 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCA3Q99758 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCA3Q99758 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ABCA3Q99758 SNORA5.1-201ENST00000384275 131 ntBASIC5.53□□□□□ -1.52
ABCA3Q99758 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ABCA3Q99758 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCA3Q99758 AL159987.2-201ENST00000432754 307 ntBASIC5.53□□□□□ -1.52
ABCA3Q99758 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.53□□□□□ -1.52
ABCA3Q99758 PPP1R11P1-201ENST00000486095 376 ntBASIC5.53□□□□□ -1.52
ABCA3Q99758 AC021242.1-201ENST00000507315 2035 ntBASIC5.53□□□□□ -1.52
ABCA3Q99758 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.53□□□□□ -1.52
ABCA3Q99758 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ABCA3Q99758 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.53□□□□□ -1.52
ABCA3Q99758 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.53□□□□□ -1.52
ABCA3Q99758 AC037471.2-201ENST00000564941 598 ntBASIC5.53□□□□□ -1.52
ABCA3Q99758 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.53□□□□□ -1.52
ABCA3Q99758 IMMP1LP1-201ENST00000605170 488 ntBASIC5.53□□□□□ -1.52
ABCA3Q99758 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.53□□□□□ -1.52
ABCA3Q99758 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCA3Q99758 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ABCA3Q99758 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
ABCA3Q99758 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms