Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL034370.1-201ENST00000397254 1590 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 OR11H4-201ENST00000315409 1082 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 MIR634-201ENST00000385208 97 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 RPL7P4-203ENST00000430239 730 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 PPIAP3-201ENST00000450588 505 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 NPM1P29-201ENST00000483112 803 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 HSPD1P15-201ENST00000505573 1122 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AC027455.1-201ENST00000574104 594 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AC090912.3-201ENST00000609775 533 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AC099669.2-201ENST00000616549 437 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 USP9YP4-201ENST00000424401 1745 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 RN7SKP159-201ENST00000410657 292 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 PTMAP3-201ENST00000447474 330 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 RNA5SP103-201ENST00000459503 118 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AC011270.1-201ENST00000558606 583 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AC092354.2-201ENST00000607786 514 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 TTC39DP-201ENST00000416781 1688 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 RPL7P2-201ENST00000427639 268 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 RPS20P4-201ENST00000461659 355 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 AL591473.1-201ENST00000464297 313 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 FP325313.1-201ENST00000638228 703 ntBASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 OR51C1P-202ENST00000641159 1444 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 AC092162.1-201ENST00000432828 434 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 EIF4A2P2-201ENST00000455776 1070 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 RPL7P49-201ENST00000471402 708 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 RPS4XP15-201ENST00000489210 795 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 RN7SKP157-201ENST00000516174 282 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 RN7SKP83-201ENST00000516512 178 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 U6.105-201ENST00000637379 88 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 AC008013.2-202ENST00000637965 364 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 TRIM60P17-201ENST00000415181 719 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 PDSS1P1-201ENST00000422953 1114 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 RPS4XP4-201ENST00000443195 763 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 AC090686.1-201ENST00000481577 749 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 PAICSP4-201ENST00000517543 1253 ntBASIC2.9□□□□□ -1.94
ALMS1Q8TCU4 AC092435.3-201ENST00000565538 3654 ntBASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ALMS1Q8TCU4 AC024560.2-201ENST00000507981 1497 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms