Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.16□□□□□ -1.58
CCNA1P78396 RPL23AP38-201ENST00000423801 469 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 AC093084.1-201ENST00000424233 687 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 AC022022.1-201ENST00000430304 178 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNA1P78396 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.16□□□□□ -1.58
CCNA1P78396 RPL23AP43-201ENST00000446445 471 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 AC104651.2-201ENST00000447549 528 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNA1P78396 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNA1P78396 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNA1P78396 RPS7P7-201ENST00000463499 571 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 AC091153.1-201ENST00000466297 402 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 NPM1P29-201ENST00000483112 803 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.16□□□□□ -1.58
CCNA1P78396 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.16□□□□□ -1.58
CCNA1P78396 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.16□□□□□ -1.58
CCNA1P78396 AC090515.3-201ENST00000560431 315 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 AC113403.1-201ENST00000604910 193 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 uc_338.13-201ENST00000618243 179 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 AC015908.5-201ENST00000623289 343 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 AC034229.5-201ENST00000624258 185 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 AL139254.3-201ENST00000641097 674 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNA1P78396 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCNA1P78396 MAPK10-286ENST00000641208 8747 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCNA1P78396 AC021242.1-201ENST00000507315 2035 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 CPHL1P-201ENST00000461341 3407 ntBASIC5.16□□□□□ -1.58
CCNA1P78396 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.16□□□□□ -1.58
CCNA1P78396 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CCNA1P78396 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CCNA1P78396 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
CCNA1P78396 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.15□□□□□ -1.58
CCNA1P78396 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCNA1P78396 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCNA1P78396 RNU1-130P-201ENST00000363930 160 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 AL022722.2-201ENST00000402519 180 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 EIF4HP2-201ENST00000424380 563 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNA1P78396 RPL34P6-201ENST00000432390 345 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 HSFY6P-201ENST00000445573 403 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNA1P78396 AL359073.1-201ENST00000448036 403 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 RPS20P4-201ENST00000461659 355 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.15□□□□□ -1.59
CCNA1P78396 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.15□□□□□ -1.59
CCNA1P78396 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.15□□□□□ -1.59
CCNA1P78396 RPL21P129-201ENST00000491732 478 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 AC023424.1-201ENST00000496058 459 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNA1P78396 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.15□□□□□ -1.59
CCNA1P78396 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.15□□□□□ -1.59
CCNA1P78396 EIF4EP5-201ENST00000528228 640 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 OR8A2P-201ENST00000528631 952 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.15□□□□□ -1.59
CCNA1P78396 BNIP3P33-201ENST00000598912 569 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 AC020634.1-201ENST00000608701 549 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.15□□□□□ -1.59
CCNA1P78396 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.15□□□□□ -1.59
CCNA1P78396 LINC00622-201ENST00000562811 1570 ntBASIC5.15□□□□□ -1.59
CCNA1P78396 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCNA1P78396 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCNA1P78396 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCNA1P78396 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCNA1P78396 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCNA1P78396 MAPK10-320ENST00000641462 6696 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 AC008549.2-201ENST00000333482 706 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 AC025750.1-201ENST00000399891 379 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.14□□□□□ -1.59
CCNA1P78396 RCC2P2-201ENST00000422174 918 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.14□□□□□ -1.59
CCNA1P78396 NPM1P26-201ENST00000426339 738 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 MTND6P18-201ENST00000439477 513 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 MRPL48P1-201ENST00000445390 636 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 PTMAP3-201ENST00000447474 330 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 AC012671.1-201ENST00000451912 203 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 DHFRP3-201ENST00000455595 559 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 AP000942.1-201ENST00000463969 747 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 AC108475.1-201ENST00000507880 950 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.14□□□□□ -1.59
CCNA1P78396 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.14□□□□□ -1.59
CCNA1P78396 RNA5SP249-201ENST00000516127 99 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCNA1P78396 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.14□□□□□ -1.59
CCNA1P78396 AL591034.3-201ENST00000605511 685 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 AP003497.2-201ENST00000624220 967 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCNA1P78396 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CCNA1P78396 AC011755.1-201ENST00000623763 2049 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 AC010329.2-201ENST00000595195 2737 ntBASIC5.14□□□□□ -1.59
CCNA1P78396 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCNA1P78396 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCNA1P78396 BX005019.1-201ENST00000561881 1810 ntBASIC5.13□□□□□ -1.59
CCNA1P78396 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCNA1P78396 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNA1P78396 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCNA1P78396 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms