Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC090142.2-201ENST00000483263 416 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AC090013.1-201ENST00000485147 480 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 RN7SL184P-201ENST00000488308 297 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AC108022.1-201ENST00000493466 478 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AC104164.2-201ENST00000496953 495 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CKS1BP61024 UBE2CP3-201ENST00000502715 450 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AC010374.1-201ENST00000503762 1237 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.24□□□□□ -1.89
CKS1BP61024 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.24□□□□□ -1.89
CKS1BP61024 COX6B1P5-201ENST00000509843 249 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 RNU6-709P-201ENST00000517257 104 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 MTND5P21-201ENST00000531961 522 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS1BP61024 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.24□□□□□ -1.89
CKS1BP61024 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.24□□□□□ -1.89
CKS1BP61024 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.24□□□□□ -1.89
CKS1BP61024 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.24□□□□□ -1.89
CKS1BP61024 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS1BP61024 AC105254.2-201ENST00000603636 436 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS1BP61024 AC015804.1-201ENST00000622935 435 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS1BP61024 AC006453.5-201ENST00000636451 619 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS1BP61024 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CKS1BP61024 AC097504.1-201ENST00000515103 2415 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS1BP61024 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CKS1BP61024 AP001148.1-201ENST00000624124 2359 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS1BP61024 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CKS1BP61024 PANDAR-201ENST00000629595 1506 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS1BP61024 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS1BP61024 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS1BP61024 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CKS1BP61024 USP8P1-201ENST00000494673 3183 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CKS1BP61024 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CKS1BP61024 MIR92A2-201ENST00000385299 75 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CKS1BP61024 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CKS1BP61024 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS1BP61024 AC069218.2-201ENST00000411665 344 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CKS1BP61024 MTCO1P52-201ENST00000433928 531 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS1BP61024 HLA-N-201ENST00000437516 135 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 ELOCP8-201ENST00000439309 332 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 ELOCP15-201ENST00000442090 332 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS1BP61024 KNOP1P3-201ENST00000446933 426 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS1BP61024 RPS27AP2-201ENST00000457576 465 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 RPS17P2-201ENST00000461663 408 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS1BP61024 TMED11P-201ENST00000479478 690 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AC092451.1-201ENST00000480211 153 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 RN7SL319P-201ENST00000480656 221 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS1BP61024 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CKS1BP61024 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS1BP61024 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS1BP61024 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.23□□□□□ -1.89
CKS1BP61024 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS1BP61024 AC005363.1-201ENST00000530779 351 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 OR7E128P-201ENST00000532736 1024 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 PDCL2P2-201ENST00000533651 189 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.23□□□□□ -1.89
CKS1BP61024 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.23□□□□□ -1.89
CKS1BP61024 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.23□□□□□ -1.89
CKS1BP61024 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC3.23□□□□□ -1.89
CKS1BP61024 MIR3186-201ENST00000577404 85 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AP001180.3-201ENST00000582221 145 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AC027243.2-201ENST00000602530 724 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AL592436.1-201ENST00000605135 558 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AL589935.2-201ENST00000616471 1231 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS1BP61024 AC136428.4-201ENST00000634254 1155 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS1BP61024 CASC19-264ENST00000641912 1184 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CKS1BP61024 AC008758.3-201ENST00000507003 1829 ntBASIC3.23□□□□□ -1.89
CKS1BP61024 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS1BP61024 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CKS1BP61024 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CKS1BP61024 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.23□□□□□ -1.89
CKS1BP61024 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CKS1BP61024 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CKS1BP61024 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CKS1BP61024 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.23□□□□□ -1.89
CKS1BP61024 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CKS1BP61024 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.22□□□□□ -1.89
CKS1BP61024 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CKS1BP61024 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CKS1BP61024 AL031119.1-201ENST00000404707 1879 ntBASIC3.22□□□□□ -1.89
CKS1BP61024 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms