Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH12P55289 AC007204.2-201ENST00000615022 616 ntBASIC4.74□□□□□ -1.65
CDH12P55289 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH12P55289 AC005840.5-201ENST00000619166 599 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AC145207.9-201ENST00000623802 325 ntBASIC4.74□□□□□ -1.65
CDH12P55289 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 CYP4F35P-202ENST00000636121 390 ntBASIC4.74□□□□□ -1.65
CDH12P55289 SAMMSON-209ENST00000641222 1100 ntBASIC4.74□□□□□ -1.65
CDH12P55289 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 MTND4P10-201ENST00000446199 1363 ntBASIC4.74□□□□□ -1.65
CDH12P55289 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH12P55289 ZNF876P-202ENST00000398732 1485 ntBASIC4.74□□□□□ -1.65
CDH12P55289 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH12P55289 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH12P55289 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH12P55289 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
CDH12P55289 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH12P55289 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CDH12P55289 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH12P55289 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH12P55289 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH12P55289 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CDH12P55289 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH12P55289 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH12P55289 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH12P55289 RNU6-249P-201ENST00000363016 102 ntBASIC4.73□□□□□ -1.65
CDH12P55289 RNU4-92P-201ENST00000363783 136 ntBASIC4.73□□□□□ -1.65
CDH12P55289 RNU6-98P-201ENST00000384173 107 ntBASIC4.73□□□□□ -1.65
CDH12P55289 RNU6-729P-201ENST00000384399 107 ntBASIC4.73□□□□□ -1.65
CDH12P55289 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDH12P55289 RN7SKP278-201ENST00000410504 342 ntBASIC4.73□□□□□ -1.65
CDH12P55289 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.73□□□□□ -1.65
CDH12P55289 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH12P55289 HMGB1P49-201ENST00000418882 569 ntBASIC4.73□□□□□ -1.65
CDH12P55289 AC027644.1-201ENST00000419595 298 ntBASIC4.73□□□□□ -1.65
CDH12P55289 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH12P55289 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 RAC1P8-201ENST00000427086 527 ntBASIC4.73□□□□□ -1.65
CDH12P55289 COX6CP13-201ENST00000428703 226 ntBASIC4.73□□□□□ -1.65
CDH12P55289 HIGD1AP4-201ENST00000430194 280 ntBASIC4.73□□□□□ -1.65
CDH12P55289 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH12P55289 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH12P55289 MTND2P22-201ENST00000444325 1033 ntBASIC4.73□□□□□ -1.65
CDH12P55289 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH12P55289 RN7SL184P-201ENST00000488308 297 ntBASIC4.73□□□□□ -1.65
CDH12P55289 RPL5P23-201ENST00000496040 868 ntBASIC4.73□□□□□ -1.65
CDH12P55289 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH12P55289 RNU6-513P-201ENST00000516104 104 ntBASIC4.73□□□□□ -1.65
CDH12P55289 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.73□□□□□ -1.65
CDH12P55289 AC012400.1-201ENST00000518452 381 ntBASIC4.73□□□□□ -1.65
CDH12P55289 HMGB1P1-201ENST00000522557 636 ntBASIC4.73□□□□□ -1.65
CDH12P55289 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH12P55289 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.73□□□□□ -1.65
CDH12P55289 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH12P55289 AC090888.3-201ENST00000558917 509 ntBASIC4.73□□□□□ -1.65
CDH12P55289 SNORD95-201ENST00000579879 68 ntBASIC4.73□□□□□ -1.65
CDH12P55289 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 AC125494.3-201ENST00000602759 455 ntBASIC4.73□□□□□ -1.65
CDH12P55289 AL020997.3-201ENST00000602843 359 ntBASIC4.73□□□□□ -1.65
CDH12P55289 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 AL139344.1-201ENST00000605228 195 ntBASIC4.73□□□□□ -1.65
CDH12P55289 STMN1P1-201ENST00000617809 440 ntBASIC4.73□□□□□ -1.65
CDH12P55289 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 AC024595.1-201ENST00000623088 387 ntBASIC4.73□□□□□ -1.65
CDH12P55289 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH12P55289 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH12P55289 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH12P55289 CASC19-221ENST00000641309 1382 ntBASIC4.73□□□□□ -1.65
CDH12P55289 AC012321.1-201ENST00000561622 1588 ntBASIC4.73□□□□□ -1.65
CDH12P55289 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH12P55289 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH12P55289 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDH12P55289 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.72□□□□□ -1.65
CDH12P55289 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH12P55289 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH12P55289 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CDH12P55289 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH12P55289 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH12P55289 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH12P55289 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH12P55289 U3.3-201ENST00000362986 216 ntBASIC4.72□□□□□ -1.65
CDH12P55289 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH12P55289 RNU6-549P-201ENST00000384433 107 ntBASIC4.72□□□□□ -1.65
CDH12P55289 SNORA17A-201ENST00000391185 133 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC013442.1-201ENST00000397347 228 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC009804.1-201ENST00000400949 179 ntBASIC4.72□□□□□ -1.65
CDH12P55289 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.72□□□□□ -1.65
CDH12P55289 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH12P55289 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms