Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.28□□□□□ -1.72
GTF2A1P52655 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.28□□□□□ -1.72
GTF2A1P52655 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.28□□□□□ -1.72
GTF2A1P52655 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.28□□□□□ -1.72
GTF2A1P52655 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GTF2A1P52655 AL592295.2-201ENST00000612578 206 ntBASIC4.28□□□□□ -1.72
GTF2A1P52655 CXADRP3-202ENST00000617265 1100 ntBASIC4.28□□□□□ -1.72
GTF2A1P52655 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
GTF2A1P52655 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
GTF2A1P52655 AC015722.2-201ENST00000622210 551 ntBASIC4.28□□□□□ -1.72
GTF2A1P52655 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.28□□□□□ -1.72
GTF2A1P52655 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
GTF2A1P52655 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
GTF2A1P52655 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
GTF2A1P52655 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
GTF2A1P52655 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GTF2A1P52655 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.73
GTF2A1P52655 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GTF2A1P52655 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GTF2A1P52655 AP000756.2-201ENST00000624168 2567 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GTF2A1P52655 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
GTF2A1P52655 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GTF2A1P52655 VPS35P1-201ENST00000563400 1518 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 ZNF826P-207ENST00000622273 1910 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 LINC00561-201ENST00000565815 2738 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.27□□□□□ -1.73
GTF2A1P52655 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GTF2A1P52655 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GTF2A1P52655 HMGN2P8-201ENST00000391458 268 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AL136116.2-201ENST00000404020 785 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 DUTP5-201ENST00000406790 469 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GTF2A1P52655 AC069218.2-201ENST00000411665 344 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 TBCAP2-201ENST00000416175 326 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AC019050.1-201ENST00000418508 492 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GTF2A1P52655 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.27□□□□□ -1.73
GTF2A1P52655 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.27□□□□□ -1.73
GTF2A1P52655 CDY14P-201ENST00000431260 1014 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AC087650.1-201ENST00000431445 468 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 CDY12P-201ENST00000440679 1015 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.27□□□□□ -1.73
GTF2A1P52655 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.27□□□□□ -1.73
GTF2A1P52655 CDY13P-201ENST00000445813 1015 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.27□□□□□ -1.73
GTF2A1P52655 CDY23P-201ENST00000451661 1014 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.27□□□□□ -1.73
GTF2A1P52655 AC010307.1-201ENST00000467206 836 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 RPS4XP1-201ENST00000482189 787 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 RPS27AP16-201ENST00000492222 470 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 RPL23AP72-201ENST00000492447 435 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 RN7SL649P-201ENST00000496974 275 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 PFN1P8-201ENST00000497012 543 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.27□□□□□ -1.73
GTF2A1P52655 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.27□□□□□ -1.73
GTF2A1P52655 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.27□□□□□ -1.73
GTF2A1P52655 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.27□□□□□ -1.73
GTF2A1P52655 AL389895.1-201ENST00000554127 252 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AL049839.1-201ENST00000556151 657 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AC068020.1-201ENST00000594215 661 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.27□□□□□ -1.73
GTF2A1P52655 AL589674.2-201ENST00000604304 337 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AC015922.4-201ENST00000612568 690 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AC243960.7-201ENST00000623532 707 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 AC011815.3-201ENST00000624194 473 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GTF2A1P52655 ZNF733P-202ENST00000444809 1573 ntBASIC4.27□□□□□ -1.73
GTF2A1P52655 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GTF2A1P52655 MFSD8-236ENST00000641509 4050 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 AC010329.2-201ENST00000595195 2737 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
GTF2A1P52655 RNA5SP183-201ENST00000362452 119 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 SNORA17.1-201ENST00000362945 126 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.26□□□□□ -1.73
GTF2A1P52655 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.26□□□□□ -1.73
GTF2A1P52655 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.26□□□□□ -1.73
GTF2A1P52655 VN1R3-201ENST00000418822 919 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 NPM1P26-201ENST00000426339 738 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.26□□□□□ -1.73
GTF2A1P52655 HMGB3P10-201ENST00000434734 572 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 OR7E125P-201ENST00000443450 846 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.26□□□□□ -1.73
GTF2A1P52655 KNOP1P3-201ENST00000446933 426 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 OR1H1P-201ENST00000448731 937 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 FAR2P1-206ENST00000449736 709 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.26□□□□□ -1.73
GTF2A1P52655 AP001086.1-201ENST00000494882 321 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.26□□□□□ -1.73
GTF2A1P52655 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.26□□□□□ -1.73
GTF2A1P52655 AC026784.1-201ENST00000507986 352 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 RNA5SP43-201ENST00000516559 110 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.26□□□□□ -1.73
GTF2A1P52655 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.26□□□□□ -1.73
GTF2A1P52655 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.26□□□□□ -1.73
GTF2A1P52655 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.26□□□□□ -1.73
GTF2A1P52655 NMNAT1P1-201ENST00000554095 876 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.26□□□□□ -1.73
GTF2A1P52655 AC093249.4-201ENST00000564755 259 ntBASIC4.26□□□□□ -1.73
GTF2A1P52655 MIR4330-201ENST00000579077 105 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms