Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 MIR8084-201ENST00000614105 89 ntBASIC4.44□□□□□ -1.7
SOX3P41225 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX3P41225 RNU6-368P-201ENST00000620928 107 ntBASIC4.44□□□□□ -1.7
SOX3P41225 RNU6-538P-201ENST00000622329 107 ntBASIC4.44□□□□□ -1.7
SOX3P41225 AC068880.4-201ENST00000623082 495 ntBASIC4.44□□□□□ -1.7
SOX3P41225 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX3P41225 AL590396.2-201ENST00000636511 1041 ntBASIC4.44□□□□□ -1.7
SOX3P41225 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SOX3P41225 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SOX3P41225 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX3P41225 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX3P41225 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
SOX3P41225 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX3P41225 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SOX3P41225 AC139713.2-215ENST00000641428 5037 ntBASIC4.43□□□□□ -1.7
SOX3P41225 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SOX3P41225 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SOX3P41225 AC083899.2-201ENST00000423285 1376 ntBASIC4.43□□□□□ -1.7
SOX3P41225 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
SOX3P41225 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX3P41225 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SOX3P41225 RNVU1-6-201ENST00000364688 164 ntBASIC4.43□□□□□ -1.7
SOX3P41225 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SOX3P41225 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX3P41225 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SOX3P41225 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SOX3P41225 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX3P41225 RNU4-27P-201ENST00000410889 139 ntBASIC4.43□□□□□ -1.7
SOX3P41225 RSU1P3-201ENST00000412878 835 ntBASIC4.43□□□□□ -1.7
SOX3P41225 TATDN1P1-201ENST00000414123 891 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX3P41225 OR13Z1P-201ENST00000416141 834 ntBASIC4.43□□□□□ -1.7
SOX3P41225 BX510359.2-201ENST00000417920 305 ntBASIC4.43□□□□□ -1.7
SOX3P41225 RPL23AP4-201ENST00000427757 463 ntBASIC4.43□□□□□ -1.7
SOX3P41225 RPS17P8-201ENST00000434525 335 ntBASIC4.43□□□□□ -1.7
SOX3P41225 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX3P41225 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.43□□□□□ -1.7
SOX3P41225 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX3P41225 RPS5P7-201ENST00000456664 608 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC006967.1-201ENST00000467608 589 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC011005.3-201ENST00000491624 395 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC104971.1-201ENST00000495117 578 ntBASIC4.43□□□□□ -1.7
SOX3P41225 RPS4XP18-201ENST00000495480 763 ntBASIC4.43□□□□□ -1.7
SOX3P41225 ARL4AP1-201ENST00000503220 705 ntBASIC4.43□□□□□ -1.7
SOX3P41225 RFPL4AP5-201ENST00000514977 504 ntBASIC4.43□□□□□ -1.7
SOX3P41225 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC112198.4-201ENST00000515450 351 ntBASIC4.43□□□□□ -1.7
SOX3P41225 RNU6-709P-201ENST00000517257 104 ntBASIC4.43□□□□□ -1.7
SOX3P41225 BUD31P1-201ENST00000521828 359 ntBASIC4.43□□□□□ -1.7
SOX3P41225 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
SOX3P41225 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX3P41225 C1DP5-201ENST00000525775 383 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX3P41225 AC137768.1-201ENST00000549998 553 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC063949.1-201ENST00000552900 865 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC087477.6-201ENST00000559595 843 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX3P41225 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX3P41225 BNIP3P39-201ENST00000601077 554 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC018645.2-201ENST00000609151 472 ntBASIC4.43□□□□□ -1.7
SOX3P41225 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SOX3P41225 uc_338.18-201ENST00000615451 175 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC234782.5-201ENST00000617723 324 ntBASIC4.43□□□□□ -1.7
SOX3P41225 AC022306.3-201ENST00000619930 550 ntBASIC4.43□□□□□ -1.7
SOX3P41225 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX3P41225 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX3P41225 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX3P41225 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX3P41225 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.43□□□□□ -1.7
SOX3P41225 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX3P41225 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX3P41225 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SOX3P41225 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX3P41225 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SOX3P41225 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX3P41225 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SOX3P41225 AL359922.3-201ENST00000624779 1670 ntBASIC4.42□□□□□ -1.7
SOX3P41225 DDX18P4-201ENST00000511690 1966 ntBASIC4.42□□□□□ -1.7
SOX3P41225 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SOX3P41225 TLK1P1-201ENST00000456760 2440 ntBASIC4.42□□□□□ -1.7
SOX3P41225 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
SOX3P41225 OR4K17-201ENST00000315543 1032 ntBASIC4.42□□□□□ -1.7
SOX3P41225 RNU6-252P-201ENST00000363232 107 ntBASIC4.42□□□□□ -1.7
SOX3P41225 RNU1-83P-201ENST00000363426 164 ntBASIC4.42□□□□□ -1.7
SOX3P41225 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SOX3P41225 AC104297.1-201ENST00000393779 870 ntBASIC4.42□□□□□ -1.7
SOX3P41225 AL034370.1-201ENST00000397254 1590 ntBASIC4.42□□□□□ -1.7
SOX3P41225 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX3P41225 AL355143.1-201ENST00000407101 841 ntBASIC4.42□□□□□ -1.7
SOX3P41225 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX3P41225 RNU2-50P-201ENST00000410494 143 ntBASIC4.42□□□□□ -1.7
SOX3P41225 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX3P41225 AL158050.1-201ENST00000416077 457 ntBASIC4.42□□□□□ -1.7
SOX3P41225 AC019050.1-201ENST00000418508 492 ntBASIC4.42□□□□□ -1.7
SOX3P41225 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX3P41225 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX3P41225 LINC00993-201ENST00000420453 540 ntBASIC4.42□□□□□ -1.7
SOX3P41225 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX3P41225 AL606495.1-201ENST00000422100 813 ntBASIC4.42□□□□□ -1.7
SOX3P41225 AC005154.2-201ENST00000438110 379 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms