Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNA5SP453-201ENST00000362503 119 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 RN7SKP149-201ENST00000363008 344 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 RNU6-623P-201ENST00000363143 105 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 RNU6-1339P-201ENST00000363574 91 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 RNU6-560P-201ENST00000364007 108 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC6A4P31645 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC6A4P31645 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC6A4P31645 MIR105-1-201ENST00000385222 81 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 HSPA8P15-201ENST00000401676 786 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC6A4P31645 SETP15-201ENST00000412724 337 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AC005033.1-201ENST00000428904 813 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AC234064.1-201ENST00000436312 247 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 AL445567.1-201ENST00000439121 144 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 AC118469.1-201ENST00000442943 488 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 ARL5AP2-201ENST00000444698 533 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 RHEBP2-201ENST00000450289 600 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC6A4P31645 MTND4LP3-201ENST00000468320 276 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC6A4P31645 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 BX284632.1-201ENST00000478218 541 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 RPL7P40-201ENST00000481703 745 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 IGBP1P4-201ENST00000503202 879 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AC111000.2-201ENST00000507775 550 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.48□□□□□ -1.53
SLC6A4P31645 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC6A4P31645 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC6A4P31645 HAUS8P1-201ENST00000549005 542 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AC022069.1-201ENST00000582910 658 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 AC009027.1-201ENST00000604510 479 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AC105227.2-201ENST00000615075 605 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 MIR6133-201ENST00000617057 108 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 uc_338.7-201ENST00000621834 124 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 AC079248.2-201ENST00000623779 326 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 AP003400.3-201ENST00000624904 346 ntBASIC5.48□□□□□ -1.53
SLC6A4P31645 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC6A4P31645 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC6A4P31645 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC6A4P31645 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SLC6A4P31645 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SLC6A4P31645 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC6A4P31645 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SLC6A4P31645 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.48□□□□□ -1.53
SLC6A4P31645 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.48□□□□□ -1.53
SLC6A4P31645 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC6A4P31645 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC6A4P31645 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC6A4P31645 AL022311.1-201ENST00000623726 19416 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC6A4P31645 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC6A4P31645 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC6A4P31645 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC6A4P31645 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SLC6A4P31645 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SLC6A4P31645 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC6A4P31645 AC093671.1-201ENST00000624981 2929 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SLC6A4P31645 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC6A4P31645 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC6A4P31645 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC6A4P31645 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC6A4P31645 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC6A4P31645 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC6A4P31645 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC6A4P31645 THAP5P1-201ENST00000439089 262 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 RPS11P7-201ENST00000442125 465 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 MTND2P4-201ENST00000445034 1004 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC6A4P31645 AL929288.2-201ENST00000446368 407 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 AC005002.1-201ENST00000447458 540 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.47□□□□□ -1.53
SLC6A4P31645 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SLC6A4P31645 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SLC6A4P31645 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SLC6A4P31645 AC092754.2-201ENST00000463506 460 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 LINC00888-204ENST00000487386 421 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC6A4P31645 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.47□□□□□ -1.53
SLC6A4P31645 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC6A4P31645 RPS4XP20-201ENST00000505751 772 ntBASIC5.47□□□□□ -1.53
SLC6A4P31645 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.47□□□□□ -1.53
SLC6A4P31645 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms