Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNA5SP388-201ENST00000362584 119 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 GTF3AP1-201ENST00000416942 1004 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC245047.2-201ENST00000441060 530 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 CASP3P1-201ENST00000446037 609 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 KNOP1P3-201ENST00000446933 426 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AL627224.1-201ENST00000448334 444 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 VN1R32P-201ENST00000452234 905 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC079804.1-201ENST00000461922 436 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC096741.1-201ENST00000472250 846 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC074386.1-201ENST00000476560 767 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 CDH12P2-201ENST00000504393 298 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 PGAM1P13-201ENST00000507497 754 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 PDCD5P1-201ENST00000543528 309 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 HMGB3P26-201ENST00000560051 582 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 MIMT1-201ENST00000597105 1050 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC105254.2-201ENST00000603636 436 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC010201.1-201ENST00000605051 540 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC023813.4-201ENST00000607580 580 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AL121612.2-201ENST00000612261 482 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 MIR6862-1-201ENST00000613016 70 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 MIR6862-2-201ENST00000614755 70 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC090527.3-201ENST00000619041 548 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AP002967.1-201ENST00000624203 539 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 OR5AC4P-202ENST00000642086 985 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC007342.7-201ENST00000624610 2337 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 PABPC1P6-201ENST00000445594 1829 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC027287.1-201ENST00000553115 1453 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC010300.1-201ENST00000600671 5134 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 RNA5SP502-201ENST00000362694 119 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 RNU1-63P-201ENST00000383902 164 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 RN7SKP229-201ENST00000410465 302 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 RN7SKP56-201ENST00000410513 331 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 RNA5SP306-201ENST00000411087 107 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AL590609.2-201ENST00000421430 368 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 YY1P1-201ENST00000427625 668 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 OR52B5P-201ENST00000435337 951 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC022431.1-201ENST00000450941 438 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC090142.1-201ENST00000465776 462 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 COPS8P2-201ENST00000473228 627 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC072052.1-201ENST00000496556 306 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 RNA5SP228-201ENST00000516232 133 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 OR11J2P-201ENST00000555298 907 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 SULT1C2P2-201ENST00000562517 294 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AL360157.1-201ENST00000565962 87 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQA1P01909 MIR1269B-201ENST00000580405 75 ntBASIC3.41□□□□□ -1.86
HLA-DQA1P01909 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms