Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RAPGEF3O95398 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RAPGEF3O95398 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RAPGEF3O95398 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RAPGEF3O95398 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RAPGEF3O95398 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RAPGEF3O95398 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AL359715.4-201ENST00000606629 1436 ntBASIC7.12□□□□□ -1.27
RAPGEF3O95398 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 RNU6-298P-201ENST00000390888 96 ntBASIC7.12□□□□□ -1.27
RAPGEF3O95398 RN7SKP202-201ENST00000410439 330 ntBASIC7.12□□□□□ -1.27
RAPGEF3O95398 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 RN7SL132P-201ENST00000478131 296 ntBASIC7.12□□□□□ -1.27
RAPGEF3O95398 RPL21P47-201ENST00000483696 477 ntBASIC7.12□□□□□ -1.27
RAPGEF3O95398 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 RNU1-45P-201ENST00000517191 141 ntBASIC7.12□□□□□ -1.27
RAPGEF3O95398 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AP000919.1-202ENST00000581139 1264 ntBASIC7.12□□□□□ -1.27
RAPGEF3O95398 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AC083865.1-201ENST00000636634 831 ntBASIC7.12□□□□□ -1.27
RAPGEF3O95398 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RAPGEF3O95398 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RAPGEF3O95398 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RAPGEF3O95398 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RAPGEF3O95398 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RAPGEF3O95398 SNORA73.1-201ENST00000363107 205 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 Y_RNA.333-201ENST00000365274 102 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 RNA5SP366-201ENST00000365454 123 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 SNORA11.2-201ENST00000408318 127 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RAPGEF3O95398 CETN4P-201ENST00000432407 469 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 RPL23AP93-201ENST00000440847 484 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 SCARNA10-201ENST00000459255 330 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 HMGB1P38-201ENST00000490557 577 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC010735.1-201ENST00000567305 1026 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 MIR7853-201ENST00000584820 132 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC091979.2-201ENST00000607514 214 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC087683.2-201ENST00000611384 326 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC009464.1-201ENST00000615731 469 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 Z99129.2-201ENST00000619967 314 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC003985.2-201ENST00000562268 1669 ntBASIC7.11□□□□□ -1.27
RAPGEF3O95398 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RAPGEF3O95398 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RAPGEF3O95398 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RAPGEF3O95398 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.11□□□□□ -1.27
RAPGEF3O95398 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RAPGEF3O95398 AC092111.2-201ENST00000611627 1414 ntBASIC7.1□□□□□ -1.27
RAPGEF3O95398 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RAPGEF3O95398 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms