Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 CDY13P-201ENST00000445813 1015 ntBASIC4.55□□□□□ -1.68
SNX3O60493 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX3O60493 AL591623.2-201ENST00000449978 222 ntBASIC4.55□□□□□ -1.68
SNX3O60493 CYCSP42-201ENST00000450823 238 ntBASIC4.55□□□□□ -1.68
SNX3O60493 CDY23P-201ENST00000451661 1014 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX3O60493 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 RN7SL244P-201ENST00000493405 297 ntBASIC4.55□□□□□ -1.68
SNX3O60493 RPS6P4-201ENST00000494693 758 ntBASIC4.55□□□□□ -1.68
SNX3O60493 OR5H3P-201ENST00000502817 919 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 snoU109.6-201ENST00000516831 118 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX3O60493 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX3O60493 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.55□□□□□ -1.68
SNX3O60493 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.55□□□□□ -1.68
SNX3O60493 AL138895.2-201ENST00000603019 178 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AC090525.3-201ENST00000605601 189 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AL008729.2-201ENST00000606393 473 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AC023813.4-201ENST00000607580 580 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AL627230.1-201ENST00000613077 211 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AL121873.1-201ENST00000616013 524 ntBASIC4.55□□□□□ -1.68
SNX3O60493 LINC00901.1-201ENST00000617252 152 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AL445528.2-201ENST00000620582 470 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX3O60493 AC099494.2-201ENST00000623371 978 ntBASIC4.55□□□□□ -1.68
SNX3O60493 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX3O60493 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX3O60493 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX3O60493 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX3O60493 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX3O60493 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX3O60493 AC093311.1-201ENST00000506586 2021 ntBASIC4.55□□□□□ -1.68
SNX3O60493 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX3O60493 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SNX3O60493 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SNX3O60493 AC008432.1-201ENST00000615912 1320 ntBASIC4.54□□□□□ -1.68
SNX3O60493 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX3O60493 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SNX3O60493 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.54□□□□□ -1.68
SNX3O60493 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 BMS1P3-201ENST00000372011 932 ntBASIC4.54□□□□□ -1.68
SNX3O60493 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.54□□□□□ -1.68
SNX3O60493 RNU6-481P-201ENST00000384194 107 ntBASIC4.54□□□□□ -1.68
SNX3O60493 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 AC009804.1-201ENST00000400949 179 ntBASIC4.54□□□□□ -1.68
SNX3O60493 VN1R12P-201ENST00000403778 876 ntBASIC4.54□□□□□ -1.68
SNX3O60493 RN7SKP126-201ENST00000411143 300 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX3O60493 GTF2IP5-201ENST00000414608 731 ntBASIC4.54□□□□□ -1.68
SNX3O60493 BX664727.1-201ENST00000416024 466 ntBASIC4.54□□□□□ -1.68
SNX3O60493 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX3O60493 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX3O60493 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX3O60493 AC005189.1-201ENST00000431286 310 ntBASIC4.54□□□□□ -1.68
SNX3O60493 ELOCP18-201ENST00000434209 337 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX3O60493 SDR42E1P3-201ENST00000438345 502 ntBASIC4.54□□□□□ -1.68
SNX3O60493 YWHAZP2-201ENST00000440317 728 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AL158053.1-201ENST00000441503 453 ntBASIC4.54□□□□□ -1.68
SNX3O60493 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 AC097499.1-201ENST00000444277 208 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX3O60493 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 RN7SL222P-201ENST00000476452 299 ntBASIC4.54□□□□□ -1.68
SNX3O60493 SETP6-201ENST00000479329 568 ntBASIC4.54□□□□□ -1.68
SNX3O60493 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 AC139783.2-201ENST00000504847 1145 ntBASIC4.54□□□□□ -1.68
SNX3O60493 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 PARP4P3-201ENST00000510265 317 ntBASIC4.54□□□□□ -1.68
SNX3O60493 HMGB3P13-201ENST00000511263 607 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX3O60493 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.54□□□□□ -1.68
SNX3O60493 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.54□□□□□ -1.68
SNX3O60493 OR5M7P-201ENST00000526140 972 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 DYNLL1P4-201ENST00000549314 266 ntBASIC4.54□□□□□ -1.68
SNX3O60493 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.54□□□□□ -1.68
SNX3O60493 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.54□□□□□ -1.68
SNX3O60493 AC106734.1-201ENST00000568646 663 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AP005119.2-201ENST00000579735 1105 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms